DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and ARP6

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_013186.1 Gene:ARP6 / 850774 SGDID:S000004075 Length:438 Species:Saccharomyces cerevisiae


Alignment Length:442 Identity:104/442 - (23%)
Similarity:152/442 - (34%) Gaps:112/442 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRP-RHLNVLLDSVIGDSVIGEAAARKRGI--LTLKY 110
            :||||||...|.|           ||...:| |.||.|.....|.|.:.......:.|  :|.:.
Yeast     6 IVIDNGSYEIKFG-----------PSTNKKPFRALNALAKDKFGTSYLSNHIKNIKDISSITFRR 59

  Fly   111 PIEHGMVKNWDEMEMVWQHT-----------------YELLRADP-MDLPALLTEAPLNPKKNRE 157
            |.|.|.:..|:....:|.:.                 :.|:.::. |.||.|...|         
Yeast    60 PHELGQLTLWELESCIWDYCLFNPSEFDGFDLKEGKGHHLVASESCMTLPELSKHA--------- 115

  Fly   158 KMTEIMFEHFQVPAFYVAVQAVL-----SLYATGRTVG--------------------------- 190
              .:::||.::..:.:.:..||.     |.....||:.                           
Yeast   116 --DQVIFEEYEFDSLFKSPVAVFVPFTKSYKGEMRTISGKDEDIDIVRGNSDSTNSTSSESKNAQ 178

  Fly   191 ----------IVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMGTSAE 245
                      :|:|||...|..:|:.:|.....|..::|:.||.||..|.:.|..|...|  ..|
Yeast   179 DSGSDYHDFQLVIDSGFNCTWIIPVLKGIPYYKAVKKLDIGGRFLTGLLKETLSFRHYNM--MDE 241

  Fly   246 REIVREIKEKLCYVS-MNY---AKEMDLHG-------------------KVETYELP-DGQKIVL 286
            ..:|..|||:..:|| ::|   .|..|.|.                   :.|...|| |.|.|.|
Yeast   242 TILVNNIKEQCLFVSPVSYFDSFKTKDKHALEYVLPDFQTSFLGYVRNPRKENVPLPEDAQIITL 306

  Fly   287 GCERFRCPEALFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQ 351
            ..|.|..||..|.|.:......||.||...|::.....:|..|..|||.:||.....|...|...
Yeast   307 TDELFTIPETFFHPEISQITKPGIVEAILESLSMLPEIVRPLMVGNIVCTGGNFNLPNFAQRLAA 371

  Fly   352 DLTEMAPPSIRIKVNA-SPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVG 402
            :|....|......|:. ..|.....|...|..|...|::...:...||.|.|
Yeast   372 ELQRQLPTDWTCHVSVPEGDCALFGWEVMSQFAKTDSYRKARVTREEYYEHG 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 104/442 (24%)
ARP6NP_013186.1 ASKHA_NBD_Arp6 6..423 CDD:466816 103/440 (23%)

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