DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and DIS1

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_172777.1 Gene:DIS1 / 837876 AraportID:AT1G13180 Length:427 Species:Arabidopsis thaliana


Alignment Length:413 Identity:142/413 - (34%)
Similarity:206/413 - (49%) Gaps:59/413 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 AVVIDNGSGVCKAGFSPEDTPRAVFPSIVG-----------------RPRH---LNVLLDSVIGD 92
            |:|||||:|..|.||:....|..:.|::|.                 :.:|   :...||..|||
plant     8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADLDFYIGD 72

  Fly    93 SVIGEAAARKRGILT--LKYPIEHGMVKNWDEMEMVWQH-TYELLRADPMDLPALLTEAPLNPKK 154
                ||.|:.|...|  |.||||||.|::||.||..||. .:..||.||.|...||||:||.|.:
plant    73 ----EALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPE 133

  Fly   155 NREKMTEIMFEHFQVPAFYVAVQAVLSL---YATGR--TVGIVVDSGDGVTHTVPIYEGFALPHA 214
            :||...||:||.|.||..|:||.:||:|   |.|.:  ..|:|||.|||.||.||:.||:.:...
plant   134 SREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSC 198

  Fly   215 CVRVDLAGRDLTDYLCKLLLERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMDLHGKVETYELP 279
            ...:.:||:|:|.::.:|:.|||..:......::.|::||..||...:..||.:.|.|.....:.
plant   199 IKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIK 263

  Fly   280 DGQKIV----------LGCERFRCPEALFQPSLLGQE-VMGIHEATHHSITNCDMDLRKDMYANI 333
            ..:.:.          :|.|||..||..|.|.:...: ...:.......|.:..:|.|:.:|.||
plant   264 QWKGVKPKTGAPYTCDVGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNI 328

  Fly   334 VLSGGTTMFRNIEHRFLQDLT----------------EMAPPSIRIKVNASPDRRFSVWTGGSVL 382
            |||||:|||::...|..:||.                |:....:.:.|.:.|.:||:||.|||||
plant   329 VLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVL 393

  Fly   383 ASLTSFQNMWIDSLEYEEVGSAI 405
            :|...|........||||.|::|
plant   394 SSTPEFFASCRTKEEYEEYGASI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 142/413 (34%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 142/413 (34%)
DIS1NP_172777.1 PTZ00280 7..426 CDD:240343 142/413 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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