DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and ACT3

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001326881.1 Gene:ACT3 / 824542 AraportID:AT3G53750 Length:377 Species:Arabidopsis thaliana


Alignment Length:368 Identity:235/368 - (63%)
Similarity:291/368 - (79%) Gaps:5/368 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPIE 113
            :|.|||:|:.||||:.:|.||||||||||||||..|::.....|:.:|:.|..||||||||||||
plant    10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIE 74

  Fly   114 HGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAVQ 177
            ||:|.|||:||.:|.|| |..||..|.:.|.||||||||||.||||||:||||.|..||.|||:|
plant    75 HGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQ 139

  Fly   178 AVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMGT 242
            |||||||:|||.|||:||||||:||||||||:|||||.:|:|||||||||.|.|:|.|||.:..|
plant   140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTT 204

  Fly   243 SAEREIVREIKEKLCYVSMNYAKEMD---LHGKVE-TYELPDGQKIVLGCERFRCPEALFQPSLL 303
            :|||||||:|||||||::::|.:|::   ....|| .|||||||.|.:|.|||||||.|:|||::
plant   205 TAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMI 269

  Fly   304 GQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNAS 368
            |.|..||||.|::||..||:|:|||:|.|||||||||||..|..|..:::|.:||.|::|||.|.
plant   270 GMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAP 334

  Fly   369 PDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            |:|::|||.|||:||||::||.|||...||:|.|.:|||||||
plant   335 PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 233/366 (64%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 233/366 (64%)
ACT3NP_001326881.1 NBD_sugar-kinase_HSP70_actin 5..377 CDD:418402 233/366 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54227
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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