DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp53D and ACT12

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_190236.1 Gene:ACT12 / 823805 AraportID:AT3G46520 Length:377 Species:Arabidopsis thaliana


Alignment Length:368 Identity:233/368 - (63%)
Similarity:292/368 - (79%) Gaps:5/368 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPIE 113
            :|.|||:|:.||||:.:|.||||||||||||||..|::.....|:.:|:.|..||||||||||||
plant    10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIE 74

  Fly   114 HGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAVQ 177
            ||:|.|||:||.:|.|| |..||..|.:.|.||||||||||.||||||:||||.|..||.|||:|
plant    75 HGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 139

  Fly   178 AVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMGT 242
            |||||||:|||.|||:||||||:||||||||:|||||.:|:|||||||||:|.|:|.|||.:..|
plant   140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTT 204

  Fly   243 SAEREIVREIKEKLCYVSMNYAKEMD---LHGKVE-TYELPDGQKIVLGCERFRCPEALFQPSLL 303
            :|||||||::||||.|::::|.:|::   ....|| ::||||||.|.:|.|||||||.|||||::
plant   205 TAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMI 269

  Fly   304 GQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNAS 368
            |.|..||||.|::||..||:|:|||:|.|||||||||||..|..|..:::|.:||.|::|||.|.
plant   270 GMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAP 334

  Fly   369 PDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            |:|::|||.|||:||||::||.|||...||:|.|.:|||||||
plant   335 PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 226/361 (63%)
ACT12NP_190236.1 ASKHA_NBD_actin 8..372 CDD:466823 226/361 (63%)

Return to query results.
Submit another query.