DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and ACT11

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_187818.1 Gene:ACT11 / 820385 AraportID:AT3G12110 Length:377 Species:Arabidopsis thaliana


Alignment Length:368 Identity:238/368 - (64%)
Similarity:292/368 - (79%) Gaps:5/368 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPIE 113
            :|.|||:|:.||||:.:|.||||||||||||||..|::.....|:.:|:.|..||||||||||||
plant    10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIE 74

  Fly   114 HGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAVQ 177
            ||:|.|||:||.:|.|| |..||..|.:.|.||||||||||.||||||:||||.|..||.|||:|
plant    75 HGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 139

  Fly   178 AVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMGT 242
            |||||||:|||.|||:||||||:||||||||:|||||.:|:|||||||||||.|:|.|||.:..|
plant   140 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 204

  Fly   243 SAEREIVREIKEKLCYVSMNYAKEMD---LHGKVE-TYELPDGQKIVLGCERFRCPEALFQPSLL 303
            ||||||||::||||.|::::|.:||:   ....|| :|||||||.|.:|.|||||||.||||||:
plant   205 SAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLV 269

  Fly   304 GQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNAS 368
            |.|..||||.|::||..||:|:|||:|.|||||||||||..|..|..:::|.:||.|::|||.|.
plant   270 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAP 334

  Fly   369 PDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            |:|::|||.|||:||||::||.|||...||:|.|.:|||||||
plant   335 PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 231/361 (64%)
ACT11NP_187818.1 ASKHA_NBD_actin 8..372 CDD:466823 231/361 (64%)

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