DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and AT2G42100

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_181740.1 Gene:AT2G42100 / 818810 AraportID:AT2G42100 Length:378 Species:Arabidopsis thaliana


Alignment Length:379 Identity:234/379 - (61%)
Similarity:293/379 - (77%) Gaps:11/379 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DSNSHHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGI 105
            |......|:|.|||:|:.||||:.:|.|||||||:||||||..|::.....|:.:|:.|..:|||
plant     3 DLGDESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARRGI 67

  Fly   106 LTLKYPIEHGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQV 169
            |:||||||||:|.|||:||.:|.|| |..||.:|.:.|.||||||||||.||||||:||||.|..
plant    68 LSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAF 132

  Fly   170 PAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLL 234
            |:.|:.:|||||||::|||.|||:||||||:||||||||:|||||.:|:||||||||:||.|:::
plant   133 PSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMM 197

  Fly   235 ERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMDLHGKV-------ETYELPDGQKIVLGCERFR 292
            |||.|..|||||||||:|||||||::::|.:||:   |.       .||||||||.|.:|.||||
plant   198 ERGYTYTTSAEREIVRDIKEKLCYIAVDYEQEME---KATTSSAIDRTYELPDGQVITIGAERFR 259

  Fly   293 CPEALFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMA 357
            |||.|||.||:|.|..||||.|::||..||:|:|||:|.|||||||||||..|..|..:::..:|
plant   260 CPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALA 324

  Fly   358 PPSIRIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            |||::|||.|.|:|::|||.|||:||||:||..|||...||:|.|.||||||||
plant   325 PPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 231/372 (62%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 231/371 (62%)
AT2G42100NP_181740.1 NBD_sugar-kinase_HSP70_actin 6..378 CDD:418402 231/374 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54227
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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