DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and ACTL8

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_110439.2 Gene:ACTL8 / 81569 HGNCID:24018 Length:366 Species:Homo sapiens


Alignment Length:368 Identity:121/368 - (32%)
Similarity:186/368 - (50%) Gaps:27/368 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVG-RPRHLNVLLDSVIGDSVIGEAAARKRGIL------ 106
            |:||:|||..|||.:..:.|:.|||:||. .|...|.           |.:.||:|..|      
Human     6 VIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENP-----------GPSYARRRVSLGIDICH 59

  Fly   107 --TLKYPIEHGMVKNWDEMEMVWQHTYELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQV 169
              |..||||.|.:.||:.::.:|....|..|.:....|.::||.||....:|:||.||:||...|
Human    60 PDTFSYPIERGRILNWEGVQYLWSFVLENHRREQEVPPVIITETPLREPADRKKMLEILFELLHV 124

  Fly   170 PAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLL 234
            |:..:|.|..:||||:|...|:|||||.|:|...|.::|..||.:...::.||:||:.||.|.|.
Human   125 PSVLLADQLQMSLYASGLLTGVVVDSGYGLTRVQPFHQGRPLPASGKTLEFAGQDLSAYLLKSLF 189

  Fly   235 ERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMDLHGKVE-------TYELPDGQKIVLGCERFR 292
            :.........:.|.|...:...|||..|..:.:|...:.:       ||:||||.::.|...:..
Human   190 KEDCDRRCLFQLETVAVTQMNKCYVPQNLGEALDFRERQQSALDESNTYQLPDGSRVELTPMQRV 254

  Fly   293 CPEALFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMA 357
            .||..|.|.:..|....|..|...|:.:|::.||..:.::::..||.|::.....|..::|....
Human   255 APEMFFSPQVFEQPGPSIPRAIVESVESCEISLRPLLVSHVMACGGNTLYPGFTKRLFRELMGDH 319

  Fly   358 PPSIRIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEE 400
            ..|.:..|....:|.||||.|.||:|.|:::|:.|:...||.|
Human   320 VSSTKATVWEGSNRNFSVWLGASVVAHLSTYQSEWMSREEYGE 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 121/368 (33%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 121/368 (33%)
ACTL8NP_110439.2 ACTIN 4..363 CDD:214592 121/368 (33%)
NBD_sugar-kinase_HSP70_actin 7..362 CDD:302596 119/365 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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