DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and Actrt2

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_082789.1 Gene:Actrt2 / 73353 MGIID:1920603 Length:377 Species:Mus musculus


Alignment Length:375 Identity:166/375 - (44%)
Similarity:247/375 - (65%) Gaps:7/375 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VDSNSHHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRG 104
            :||.|    |:.|||||:||||.|.|..||.|..|:||.|:.......:......:||.|..|:.
Mouse     7 LDSPS----VIFDNGSGLCKAGLSGEIGPRHVTSSVVGYPKFKAPPTGASQKKYFVGEEALYKQE 67

  Fly   105 ILTLKYPIEHGMVKNWDEMEMVWQHTYEL-LRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQ 168
            .|:|.|||:.|:|.:||::|.:|:|.:|. |...|.:.|.|:||..|||::||||..|:|||.|:
Mouse    68 ALSLHYPIDRGLVTSWDDVEKLWRHLFEWELGVKPCERPVLVTEPSLNPRENREKTAEMMFETFE 132

  Fly   169 VPAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLL 233
            |||||::.||||:||::....|:|||||||||.|||||||::||||..::.:||:|:|:.|.:||
Mouse   133 VPAFYLSDQAVLALYSSACVTGLVVDSGDGVTCTVPIYEGYSLPHAVSKLYVAGKDITELLTRLL 197

  Fly   234 LERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMDLHGK--VETYELPDGQKIVLGCERFRCPEA 296
            |..|.......|:.:..:||||||||::...:|:....:  :..|:||||..|.:|.:.::.||.
Mouse   198 LASGRAFPCPLEKALADDIKEKLCYVALEPEEELSRRAEDVLREYKLPDGNVIYIGDQLYQAPEV 262

  Fly   297 LFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSI 361
            ||.|..||....|:.:...:|||.||.|::|.::..||||||:|:|:.::.|.|::|.::|...:
Mouse   263 LFSPDQLGTHGPGLAQMASNSITKCDADIQKTLFGEIVLSGGSTLFQGLDDRLLKELEQLASKGV 327

  Fly   362 RIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            .||:.|.|||.||.|.|.|::.||:||:.|||.:.:::|.|.::|.|:||
Mouse   328 PIKITAPPDRWFSTWIGASIVTSLSSFKQMWITAADFKEFGVSVVQRRCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 161/367 (44%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 161/366 (44%)
Actrt2NP_082789.1 NBD_sugar-kinase_HSP70_actin 6..377 CDD:302596 164/373 (44%)
ACTIN 10..377 CDD:214592 162/370 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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