DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and Actl11

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_080614.1 Gene:Actl11 / 67722 MGIID:1914972 Length:1207 Species:Mus musculus


Alignment Length:437 Identity:158/437 - (36%)
Similarity:233/437 - (53%) Gaps:63/437 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SRIKIDITN-----KRAQNILHKYL--HLPTSPGN---MSSEVD------------SNSHH---A 47
            |.:..:.||     ..:::|.|..:  ||....||   :.|.||            |:|.:   |
Mouse   795 SMVATESTNGHQFKMTSEDITHASVVAHLGLLRGNCYELVSTVDTVPVQSAVLCNRSSSPYQKMA 859

  Fly    48 AVVIDNGSGVCKAGFSPEDTPRAVFPSIV--------GRPRHLNVLLDSVIGDSVIGEAAARKRG 104
            |:|||.|:|..|.|.:.|:...:|.||.|        |:|::       |:.:...|..:...||
Mouse   860 AIVIDTGTGFTKCGLAQENHVLSVVPSQVQMLQHPPQGQPQY-------VVPEHQEGSYSVLNRG 917

  Fly   105 ILTLKYPIEHGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQ 168
            :           |.:||.:|::|||. |..|:..|.::..|:.::|::|:.||||:.||:||.|.
Mouse   918 V-----------VSDWDALEVLWQHLFYCKLKVQPEEMAVLVADSPISPRTNREKVAEILFERFH 971

  Fly   169 VPAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLL 233
            |||.....||:|:|||.|||.|:||.||.|.::..||..|...|....|:|:||.||||||.:||
Mouse   972 VPAMQTVHQALLTLYAYGRTTGLVVGSGHGTSYVAPIITGDLAPIDTYRLDVAGADLTDYLTQLL 1036

  Fly   234 LERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMDLH-GKVET-YELPDGQKIVLGCERFRCPEA 296
            |..|.::....   |:|:|||..|||:|:.|.||..: .:|:. :.|||...|.||.|||.||||
Mouse  1037 LSGGHSLPKGG---IIRQIKEACCYVAMDTATEMARNQSQVQVDFVLPDKHVITLGSERFCCPEA 1098

  Fly   297 LFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSI 361
            ||||:|||...:|:.:....||...::..::.:.||:||.||:|:......|..|:|...|    
Mouse  1099 LFQPNLLGLNQLGLPQLALLSINRLEVKQQEQLLANVVLEGGSTLINGFPERMRQELGPGA---- 1159

  Fly   362 RIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHR 408
              .|..||.|..:.|.|||::|...|||::|:...||||.|...|::
Mouse  1160 --TVLGSPHRAVAAWLGGSIMACRDSFQSLWLTRREYEEEGPWAVYK 1204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 144/377 (38%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 144/373 (39%)
Actl11NP_080614.1 Actin 860..1205 CDD:278451 143/372 (38%)
NBD_sugar-kinase_HSP70_actin 860..1204 CDD:302596 143/370 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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