DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp53D and POTEI

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001358855.1 Gene:POTEI / 653269 HGNCID:37093 Length:1097 Species:Homo sapiens


Alignment Length:405 Identity:234/405 - (57%)
Similarity:296/405 - (73%) Gaps:14/405 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IDITNKRAQNILHKYLHLPTSPGNMSSEVDSNSHHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIV 76
            |:...|:..|:| |.|.|        :|:..:...|.:|||||||:|||||:.:|.|||||||||
Human   702 IESVKKKNDNLL-KALQL--------NELTMDDDTAVLVIDNGSGMCKAGFAGDDAPRAVFPSIV 757

  Fly    77 GRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPIEHGMVKNWDEMEMVWQHT-YELLRADPMD 140
            ||||...::......:|.:|:.|..||||||||||:|||::.|||:||.:|.|| |..||..|.:
Human   758 GRPRQQGMMGGMHQKESYVGKEAQSKRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEE 822

  Fly   141 LPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPI 205
            .|.||||||||||.||||||:||||.|..||.|||:||:||||.:|||.|||:||||||||||||
Human   823 HPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAMLSLYTSGRTTGIVMDSGDGVTHTVPI 887

  Fly   206 YEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMDLH 270
            |:|.|||||.:|:|||||:|||||.|:|.|||....|.|||||||:||||||||::::.:||.:.
Human   888 YDGNALPHATLRLDLAGRELTDYLMKILTERGYRFTTMAEREIVRDIKEKLCYVALDFEQEMAMA 952

  Fly   271 GK----VETYELPDGQKIVLGCERFRCPEALFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYA 331
            ..    .::|||||||.|.:|.|.||||||||||..||.|..||||.|.:||...|:|:|||:|.
Human   953 ASSSSLEKSYELPDGQVITIGNEWFRCPEALFQPCFLGMESCGIHETTFNSIMKSDVDIRKDLYT 1017

  Fly   332 NIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSL 396
            |.||||||||:..:.||..:::..:||..::|::.|.|.|::|||.|||:||||::||.|||...
Human  1018 NTVLSGGTTMYPGMAHRMQKEIAALAPSMLKIRIIAPPKRKYSVWVGGSILASLSTFQQMWISKQ 1082

  Fly   397 EYEEVGSAIVHRKCF 411
            ||:|.|.:|||||||
Human  1083 EYDESGPSIVHRKCF 1097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 224/369 (61%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 224/368 (61%)
POTEINP_001358855.1 Ank_2 158..>361 CDD:393464
ANK repeat 174..203 CDD:293786
ANK repeat 205..236 CDD:293786
ANK repeat 238..269 CDD:293786
ANK repeat 271..302 CDD:293786
ANK repeat 304..335 CDD:293786
CCDC144C 670..>723 CDD:373382 8/29 (28%)
NBD_sugar-kinase_HSP70_actin 723..1097 CDD:388382 224/373 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D283838at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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