DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp53D and ACTA1

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001091.1 Gene:ACTA1 / 58 HGNCID:129 Length:377 Species:Homo sapiens


Alignment Length:369 Identity:235/369 - (63%)
Similarity:290/369 - (78%) Gaps:5/369 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 AVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPI 112
            |:|.|||||:.||||:.:|.||||||||||||||..|::.....||.:|:.|..|||||||||||
Human     9 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 73

  Fly   113 EHGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAV 176
            |||::.|||:||.:|.|| |..||..|.:.|.||||||||||.||||||:||||.|.|||.|||:
Human    74 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI 138

  Fly   177 QAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMG 241
            ||||||||:|||.|||:||||||||.||||||:|||||.:|:|||||||||||.|:|.|||.:..
Human   139 QAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFV 203

  Fly   242 TSAEREIVREIKEKLCYVSMNYAKEM----DLHGKVETYELPDGQKIVLGCERFRCPEALFQPSL 302
            |:|||||||:||||||||::::..||    ......::|||||||.|.:|.|||||||.|||||.
Human   204 TTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSF 268

  Fly   303 LGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNA 367
            :|.|..||||.|::||..||:|:|||:|||.|:||||||:..|..|..:::|.:||.:::||:.|
Human   269 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIA 333

  Fly   368 SPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            .|:|::|||.|||:||||::||.|||...||:|.|.:|||||||
Human   334 PPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 228/362 (63%)
ACTA1NP_001091.1 ASKHA_NBD_actin 8..372 CDD:466823 228/362 (63%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 112..125 10/12 (83%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 360..372 4/11 (36%)

Return to query results.
Submit another query.