DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and actr6

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001016472.1 Gene:actr6 / 549226 XenbaseID:XB-GENE-5860964 Length:396 Species:Xenopus tropicalis


Alignment Length:404 Identity:113/404 - (27%)
Similarity:182/404 - (45%) Gaps:57/404 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVIDNGSGVCKAGFSPEDT---PRAVFPSIVGRPRHLNV-LLDSVIGDSVIGEAAARKRGILTLK 109
            :|:|||:...|.|:|....   |...|.:...|.:.... .:|.:...|          |:..: 
 Frog     4 LVLDNGAYNAKIGYSHGQVSVIPNCQFRTKTARLKTFTANQIDEIKDPS----------GLFYI- 57

  Fly   110 YPIEHGMVKNWDEMEMVWQHTY--ELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAF 172
            .|.:.|.:.|||....||.:.:  |:.:.|..|...::||...|....:|.|.||:||.:|..|.
 Frog    58 LPYQKGYLVNWDVQRQVWDYLFGKEMFQVDFPDSNIIITEPYFNFSSIQESMNEILFEEYQFQAA 122

  Fly   173 YVAVQAVLSLYATGR-----TVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKL 232
            .......||.:...|     ...|:||||...||.||...........:|:::.|:.:|::|.::
 Frog   123 LRINAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPFCRSKKKKEGIIRINVGGKLMTNHLKEI 187

  Fly   233 LLERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMD---LHGKVET----YELPD---------- 280
            :..|  .:....|..::.::||.:||||.::.|:|:   |.|:..:    |.|||          
 Frog   188 ISYR--QLQVMDETHVINQVKEDVCYVSTDFYKDMETAKLKGEENSVMVDYVLPDFSTIKKGFCK 250

  Fly   281 -------------GQKIV-LGCERFRCPEALFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYA 331
                         |::|: |..|||..||.||.||.:|.:.|||.||..|||.|...:::...|.
 Frog   251 PREEMVFSGKTTAGEQILRLTNERFAVPEILFHPSDIGIQEMGIPEAIVHSINNLPEEMQPHFYK 315

  Fly   332 NIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNASPDRRFS-VWTGGSVLASLTSFQNMWIDS 395
            ||||:||.|:|.....|...::.::.|....:.| ..|:...| .|.||.:::....|::|.:..
 Frog   316 NIVLTGGNTLFPGFRERVFSEVRKLTPTDFDVSV-ILPENPISYAWEGGKIISENDDFEDMVVTR 379

  Fly   396 LEYEEVGSAIVHRK 409
            .:|||.|..|...|
 Frog   380 EDYEENGHIICEEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 113/404 (28%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 113/404 (28%)
actr6NP_001016472.1 ACTIN 2..394 CDD:214592 113/404 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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