DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and zgc:101810

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001007773.1 Gene:zgc:101810 / 493612 ZFINID:ZDB-GENE-041121-7 Length:394 Species:Danio rerio


Alignment Length:385 Identity:165/385 - (42%)
Similarity:244/385 - (63%) Gaps:30/385 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIG-----DSVIGEAAARKRGILTL 108
            :|.|||:|..|.||:..:.|..:||::||||   .:..|:.:|     |.::|:.|:..|.:|.:
Zfish     9 IVCDNGTGFVKCGFAGSNFPDHIFPALVGRP---IIRSDTKVGSIEIKDLMVGDEASECRSMLEV 70

  Fly   109 KYPIEHGMVKNWDEMEMVWQHTY--ELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPA 171
            .||:|:|||::|::|..:|.||:  :.|...|.|...||||.|:||.|||:|:.|:|||.::...
Zfish    71 TYPMENGMVRSWEDMIHLWDHTFGPQRLNISPPDCKVLLTEPPMNPMKNRQKIAEVMFETYRFHG 135

  Fly   172 FYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLER 236
            .|||:||||:|||.|...|:|:||||||||..|:||||:|||...|:|:||||:|.||.||||.|
Zfish   136 IYVAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLR 200

  Fly   237 GVTMGTSAEREIVREIKEKLCYVSMNYAKEMDLHGK----VETYELPDGQKIVLGCERFRCPEAL 297
            |.....:|:.|.||.:|||||:|..|..:|..|..:    ||:|.||||:.|.:|.|||..||||
Zfish   201 GYAFNHTADFETVRMMKEKLCFVGYNIEQEQQLANETTVLVESYMLPDGRMIRVGGERFGAPEAL 265

  Fly   298 FQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMF--------RNIEHRFLQ--- 351
            |||.|:..|.:|:.|...::|...|:|||.|:|.:||||||:||:        |.|:..:|:   
Zfish   266 FQPHLVNVEGVGVAELLFNTIQAADIDLRADLYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVL 330

  Fly   352 --DLTEMAPPSIRIKVNASPDRRFSVWTGGSVLAS-LTSFQNMWIDSLEYEEVGSAIVHR 408
              |..:::  ..:|::...|.|:..|:.||:|||: :...::.|:...||||.|..::.:
Zfish   331 KGDTEKLS--KFKIRIEDPPRRKHMVFMGGAVLANIMKDKESFWLSRAEYEEKGLKLLDK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 165/381 (43%)
zgc:101810NP_001007773.1 ASKHA_NBD_Arp2 7..388 CDD:466821 165/383 (43%)

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