DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and zgc:101810

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001007773.1 Gene:zgc:101810 / 493612 ZFINID:ZDB-GENE-041121-7 Length:394 Species:Danio rerio


Alignment Length:385 Identity:165/385 - (42%)
Similarity:244/385 - (63%) Gaps:30/385 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIG-----DSVIGEAAARKRGILTL 108
            :|.|||:|..|.||:..:.|..:||::||||   .:..|:.:|     |.::|:.|:..|.:|.:
Zfish     9 IVCDNGTGFVKCGFAGSNFPDHIFPALVGRP---IIRSDTKVGSIEIKDLMVGDEASECRSMLEV 70

  Fly   109 KYPIEHGMVKNWDEMEMVWQHTY--ELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPA 171
            .||:|:|||::|::|..:|.||:  :.|...|.|...||||.|:||.|||:|:.|:|||.::...
Zfish    71 TYPMENGMVRSWEDMIHLWDHTFGPQRLNISPPDCKVLLTEPPMNPMKNRQKIAEVMFETYRFHG 135

  Fly   172 FYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLER 236
            .|||:||||:|||.|...|:|:||||||||..|:||||:|||...|:|:||||:|.||.||||.|
Zfish   136 IYVAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLR 200

  Fly   237 GVTMGTSAEREIVREIKEKLCYVSMNYAKEMDLHGK----VETYELPDGQKIVLGCERFRCPEAL 297
            |.....:|:.|.||.:|||||:|..|..:|..|..:    ||:|.||||:.|.:|.|||..||||
Zfish   201 GYAFNHTADFETVRMMKEKLCFVGYNIEQEQQLANETTVLVESYMLPDGRMIRVGGERFGAPEAL 265

  Fly   298 FQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMF--------RNIEHRFLQ--- 351
            |||.|:..|.:|:.|...::|...|:|||.|:|.:||||||:||:        |.|:..:|:   
Zfish   266 FQPHLVNVEGVGVAELLFNTIQAADIDLRADLYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVL 330

  Fly   352 --DLTEMAPPSIRIKVNASPDRRFSVWTGGSVLAS-LTSFQNMWIDSLEYEEVGSAIVHR 408
              |..:::  ..:|::...|.|:..|:.||:|||: :...::.|:...||||.|..::.:
Zfish   331 KGDTEKLS--KFKIRIEDPPRRKHMVFMGGAVLANIMKDKESFWLSRAEYEEKGLKLLDK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 165/385 (43%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 165/385 (43%)
zgc:101810NP_001007773.1 ACTIN 6..382 CDD:214592 164/377 (44%)
NBD_sugar-kinase_HSP70_actin 6..382 CDD:302596 164/377 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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