DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp53D and actrt2

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001006111.1 Gene:actrt2 / 448563 XenbaseID:XB-GENE-22041684 Length:375 Species:Xenopus tropicalis


Alignment Length:368 Identity:179/368 - (48%)
Similarity:246/368 - (66%) Gaps:3/368 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 HHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLK 109
            |..||:.|.|||.||||.|.||.|.||.||:||.....:.:|.:......:||.|..||.||.|.
 Frog     8 HKPAVIFDIGSGNCKAGMSGEDLPTAVVPSVVGHLSDRSAMLGAGQQPYYVGEMAMSKRAILDLV 72

  Fly   110 YPIEHGMVKNWDEMEMVWQHTYEL-LRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFY 173
            :||:.|:||:||.|..:|::.|:. |:....:.|..||||||||.:||.||.||.||:|.|||.|
 Frog    73 FPIKEGIVKSWDNMIKIWKYLYKYELKKPSSEHPVFLTEAPLNPLRNRHKMAEIFFENFNVPAMY 137

  Fly   174 VAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGV 238
            |:.||.|:|||:|.|.|||:|.|.|:||||.||:|.|||||..::.:|||.:|.||.|||.|.|.
 Frog   138 VSHQANLALYASGLTTGIVLDVGAGITHTVAIYDGVALPHAVSKLPVAGRTITQYLMKLLTENGY 202

  Fly   239 TMGTSAEREIVREIKEKLCYVSMNYAKEMDLHGK--VETYELPDGQKIVLGCERFRCPEALFQPS 301
            ...|:|||||||:|||||||::::.:.|.:.:.|  .:.|.||||..|.:..:.||.|||||.||
 Frog   203 NFITAAEREIVRDIKEKLCYIALDPSAEYERNPKDITKEYTLPDGNVIKIDSQLFRAPEALFSPS 267

  Fly   302 LLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVN 366
            .:|.|..|:....::.|..|.:|:|:.:.:|:|||||:|:|...:.|.|::|.:.||..::|||.
 Frog   268 NIGLEAPGVQGLINNIIQKCPIDIRRALLSNVVLSGGSTLFPGFDERVLRELEKKAPDGVQIKVL 332

  Fly   367 ASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRK 409
            |:.||::|||.|.|||:|:.||:..||...||:|.|.:|||:|
 Frog   333 AATDRKYSVWIGASVLSSMDSFKENWIRKSEYDEFGPSIVHQK 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 174/361 (48%)
actrt2NP_001006111.1 ASKHA_NBD_actin_Arp-T1-3 10..368 CDD:466848 173/357 (48%)

Return to query results.
Submit another query.