DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and actr2a

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:XP_021326108.1 Gene:actr2a / 406820 ZFINID:ZDB-GENE-040426-2894 Length:399 Species:Danio rerio


Alignment Length:390 Identity:165/390 - (42%)
Similarity:241/390 - (61%) Gaps:35/390 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSV--IG----------DSVIGEAAAR 101
            ||.|||:|..|.|::..:.|..:||::||||     ::.|.  :|          |.::|:.|:.
Zfish     9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRP-----IIRSTAKVGNIEIKDYRRMDLMVGDEASE 68

  Fly   102 KRGILTLKYPIEHGMVKNWDEMEMVWQHTY--ELLRADPMDLPALLTEAPLNPKKNREKMTEIMF 164
            .|.:|.:.||:|:|:|:|||:|:.:|.:|:  |.|..|..:...||||.|:||.|||||:.|:||
Zfish    69 LRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDSRNCKILLTEPPMNPTKNREKIIEVMF 133

  Fly   165 EHFQVPAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYL 229
            |.:|....|:|:||||:|||.|...|:||||||||||..|:||||:|||...|:|:||||:|.||
Zfish   134 ETYQFSGVYIAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYL 198

  Fly   230 CKLLLERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMDLHGK----VETYELPDGQKIVLGCER 290
            .||||.||.....||:.|.||.:|||||||..|..:|..|..:    ||:|.||||:.|.:|.||
Zfish   199 IKLLLLRGYAFNHSADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRVIKVGGER 263

  Fly   291 FRCPEALFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTE 355
            |..|||||||.|:..|.:|:.|...::|...|:|.|.:.|.:||||||:||:..:..|..::|.:
Zfish   264 FEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRAEFYKHIVLSGGSTMYPGLPSRLERELKQ 328

  Fly   356 MAPPSI-----------RIKVNASPDRRFSVWTGGSVLASLTSFQ-NMWIDSLEYEEVGSAIVHR 408
            :....:           :|::...|.|:..|:.||:|||.:...: |.|:...||:|.|:.::.:
Zfish   329 LYLERVLKGDVDKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTREEYQEKGTRVLEK 393

  Fly   409  408
            Zfish   394  393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 165/390 (42%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 165/390 (42%)
actr2aXP_021326108.1 ACTIN 6..393 CDD:214592 165/388 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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