DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and actr6

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_955990.1 Gene:actr6 / 324822 ZFINID:ZDB-GENE-030131-3543 Length:396 Species:Danio rerio


Alignment Length:412 Identity:119/412 - (28%)
Similarity:184/412 - (44%) Gaps:69/412 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 AAVVIDNGSGVCKAGFSPEDT---PRAVFPSIVGRPRHLNV-LLDSVIGDSVIGEAAARKRGILT 107
            :.:|:|||:...|.|:|.|..   |.:.|.:...|.:.... .||.:...|          |:..
Zfish     2 STLVLDNGAYFAKIGYSHEKVSVIPNSQFRTKTSRLKTFTANQLDEIKDPS----------GLFY 56

  Fly   108 LKYPIEHGMVKNWDEMEMVWQHTY--ELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVP 170
            : .|.:.|.:.|||....||.|.:  |:.:.|..|...::||...|....:|.|.||:||.:|  
Zfish    57 I-LPFQKGYLVNWDVQRKVWDHLFGKEMFKVDFADTNIVITEPYFNFCSIQESMNEILFEEYQ-- 118

  Fly   171 AFYVAVQAVLSLYA------------TGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGR 223
                 .|:.|.:.|            ......||||||...||.||...|..:.....|:::.|:
Zfish   119 -----FQSALRINAGSLSAHRYFHENNSELCCIVVDSGFSFTHIVPYCRGRKMKGGICRINVGGK 178

  Fly   224 DLTDYLCKLLLERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMD---LHGKVET----YELPD- 280
            .||::|.:::..|  .:....|..::.::||.:||||.::.|:|:   |.|:..|    |.||| 
Zfish   179 LLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYKDMEIAQLKGEDNTVMKDYVLPDF 241

  Fly   281 ----------------------GQKIV-LGCERFRCPEALFQPSLLGQEVMGIHEATHHSITNCD 322
                                  |::|: |..|||..||.||.||.:|.:.|||.||..:||.|..
Zfish   242 SSIKKGFCKPLEEMNFTGKYKTGEQILRLTNERFAVPEMLFHPSDIGIQEMGIPEALVNSINNMP 306

  Fly   323 MDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNASPDRRFSVWTGGSVLASLTS 387
            .:::...|.||||:||.|:|.....|..:::..:||....:.|....:.....|.||.:||....
Zfish   307 EEMQPHFYKNIVLTGGNTLFPGFRDRVYKEVRALAPVEYDVSVVLPNNPICYSWEGGKLLAENPD 371

  Fly   388 FQNMWIDSLEYEEVGSAIVHRK 409
            |:.|.:...:|||.|..|...|
Zfish   372 FEEMAVTRDDYEENGHYICEEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 117/407 (29%)
actr6NP_955990.1 ASKHA_NBD_Arp6 3..386 CDD:466816 116/402 (29%)

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