DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and Actl7b

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001020588.1 Gene:Actl7b / 313183 RGDID:1305655 Length:417 Species:Rattus norvegicus


Alignment Length:377 Identity:153/377 - (40%)
Similarity:223/377 - (59%) Gaps:25/377 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 AVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGD----SVIGEAAARKRGILTL 108
            |:|||.||..||.|::.|..|.....|.||: |...:..|:  ||    :.:|.........|.|
  Rat    52 ALVIDLGSQYCKCGYAGEPRPTYFISSTVGK-RSAEMAADA--GDTFKETYVGHELLNMEASLKL 113

  Fly   109 KYPIEHGMVKNWDEMEMVWQHTYE-LLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAF 172
            ..|::||:|.:||.::.:|::.:. .::..|.:...|:::.||:|..||||..|:|||.|.:||.
  Rat   114 VNPLKHGVVVDWDCIQNIWEYIFHTAMKILPEEHAVLVSDPPLSPTSNREKYAELMFETFGIPAM 178

  Fly   173 YVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERG 237
            :|..||:||:|:.|:|.|:||:||.||:|.|||.||..||....|||.||.|||:||.:||.|.|
  Rat   179 HVTSQALLSIYSYGKTSGLVVESGHGVSHVVPISEGDLLPGLPSRVDYAGCDLTNYLMQLLNEAG 243

  Fly   238 VTMGTSAEREIVREIKEKLCYVSMNYAKEM-----DLHGKVETYELPDGQKIVLGCERFRCPEAL 297
            ... :.....|:..||:|.||.::...:||     :||   ..||||||:.|.:|.|||||.|.|
  Rat   244 HKF-SDDHLHIIEHIKKKCCYAALLPEEEMSLGLDELH---VDYELPDGKVITIGQERFRCSEML 304

  Fly   298 FQPSLLGQEVMGIHEATHHSITNCD-MDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAP--- 358
            |:|||:|....|:.|.|...:..|. ...:::|.||::|.||.||......||.::|:.:.|   
  Rat   305 FKPSLVGSTQPGLPELTATCLDRCQGTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLLCPGDS 369

  Fly   359 PSIRIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKC 410
            |:    |.|:|:|:.|||||||:||||.:||.:|:...|:||.|.|.::.||
  Rat   370 PT----VAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGCAAIYSKC 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 153/377 (41%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 153/377 (41%)
Actl7bNP_001020588.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39
ACTIN 51..417 CDD:214592 151/375 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

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