Protein Alignment Arp53D and Actl6b

DIOPT Version :9

• Sequence 1: NP_477037.2
• Gene: Arp53D / 36879
• FlyBaseID: FBgn0011743
• Length: 411
• Species: Drosophila melanogaster
• Sequence 2: XP_006249182.1
• Gene: Actl6b / 288563
• RGDID: 1307763
• Length: 444
• Species: Rattus norvegicus
• Alignment Length: 450
• Identity: 147/450 - (32%)
• Similarity: 224/450 - (49%)
• Gaps: 82/450 - (18%)

  Fly    36 MSSEVDSNSHHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAA 100
            ||..|.......|:|.|.||...:||::.||.|:...|.....||..:.|..:.. .:.:|..||
  Rat     1 MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKVSLPVPSPYPRGSDTLCQADF-PTTVGLLAA 64

  Fly   101 RKRGILTLK---------------------------YPIEHGMVKNWDEMEMVWQHTY-ELLRAD 137
            .:.|.|.|:                           .|:::||:::|:....:..||| :.::::
  Rat    65 EEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSE 129

  Fly   138 PMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHT 202
            |...|.|::|||.|.:..|||:||:|||.:.:|||::...|||:.:|.||:.|:|:||  |.|||
  Rat   130 PNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDS--GATHT 192

  Fly   203 --VPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMGTS-------AEREIVRE------- 251
              :|:::|:.|....|:..||| |.....|:.|.:.   |...       |.:|.|||
  Rat   193 TAIPVHDGYVLQQGIVKSPLAG-DFISMQCRELFQE---MAIDIIPPYMIAAKEPVREGAPPNWK 253

  Fly   252 IKEKLCYVSMNYAKEM------DLHGKV------------------ETYELPDGQKIVLGCERFR 292
            .||||..||.::...|      |....|                  ..||:|:|.....|.||.|
  Rat   254 KKEKLPQVSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLR 318

  Fly   293 CPEALFQPS----LLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDL 353
            .||.||.||    |.|..::|:......||..||:|:|..:|.:::::||.|:.:....|..::|
  Rat   319 IPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNREL 383

  Fly   354 TEMAPPSIRIKV---NASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKC 410
            ::..|||:|:|:   |::.:|:||.|.|||:||||.:||.|||...||||.|...|.|||
  Rat   384 SQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 443

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arp53D	NP_477037.2	ACTIN	46..411	CDD:214592	143/439 (33%)
		NBD_sugar-kinase_HSP70_actin	47..411	CDD:302596	143/438 (33%)
Actl6b	XP_006249182.1	Actin	11..444	CDD:394979	143/439 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D649708at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.010