DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and Actr1b

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_001405064.1 Gene:Actr1b / 226977 MGIID:1917446 Length:381 Species:Mus musculus


Alignment Length:370 Identity:192/370 - (51%)
Similarity:262/370 - (70%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPIE 113
            |||||||||.||||:.:..|:..||:.||||:|:.|:..::.||..||..|...||:||::||:|
Mouse    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTIRYPME 76

  Fly   114 HGMVKNWDEMEMVWQHTY--ELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAV 176
            ||:|::|::||.:||:.|  :.|:....:.|.|||||||||.|||||..|:.||.|.|||.::::
Mouse    77 HGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNVPALFISM 141

  Fly   177 QAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMG 241
            ||||||||||||.|:|:||||||||.||||||||:||:.:|||:||||::.||..||.:.|....
Mouse   142 QAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGADFH 206

  Fly   242 TSAEREIVREIKEKLCYVSMNYAKEMDLHGKVETYELPDGQKI-----VLGCERFRCPEALFQPS 301
            ||||.|:||.|||:.||:|:|..|:..|..:...|.||||..:     .:|..|||.||.||||.
Mouse   207 TSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGSTLDPSSPQVGPARFRAPELLFQPD 271

  Fly   302 LLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVN 366
            |:|.|..|:||....:|...|||||:.:::|||||||:|:|:....|.|.::.::||..::||::
Mouse   272 LVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIKIS 336

  Fly   367 ASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            |..:|.:|.|.|||:||||.:|:.||:...||||.||..:|||.|
Mouse   337 APQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 188/363 (52%)
Actr1bNP_001405064.1 ASKHA_NBD_Arp1 9..380 CDD:466820 190/367 (52%)

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