DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and act-1

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_505819.1 Gene:act-1 / 179535 WormBaseID:WBGene00000063 Length:376 Species:Caenorhabditis elegans


Alignment Length:24 Identity:9/24 - (37%)
Similarity:13/24 - (54%) Gaps:1/24 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1212 IVNVTTDDAG-TYKLEARNYAGSI 1234
            |.:|..||:| .|.:.|...||.:
 Worm   229 IASVAADDSGQAYNINADTVAGEL 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947
act-1NP_505819.1 ASKHA_NBD_actin 7..371 CDD:466823 9/24 (38%)
Blue background indicates that the domain is not in the aligned region.

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