Protein Alignment Arp53D and arp-1

DIOPT Version :9

• Sequence 1: NP_477037.2
• Gene: Arp53D / 36879
• FlyBaseID: FBgn0011743
• Length: 411
• Species: Drosophila melanogaster
• Sequence 2: NP_497108.2
• Gene: arp-1 / 175162
• WormBaseID: WBGene00013168
• Length: 374
• Species: Caenorhabditis elegans
• Alignment Length: 378
• Identity: 180/378 - (47%)
• Similarity: 255/378 - (67%)
• Gaps: 6/378 - (1%)

  Fly    36 MSSEVDSNSHHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAA 100
            |..:|.:|.   .|||||||||.||||:.|..|:..|.:.||||::..|:...:.||..||..|.
 Worm     1 MDYDVIANQ---PVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAE 62

  Fly   101 RKRGILTLKYPIEHGMVKNWDEMEMVWQHTY--ELLRADPMDLPALLTEAPLNPKKNREKMTEIM 163
            ..||:.:::||:|||:|.||.:||.:|::.:  :.|:..|.:.|.|||:|||||.||||:..||.
 Worm    63 SNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIF 127

  Fly   164 FEHFQVPAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDY 228
            ||.|.|||.|:.:||||||||||||.|:|:||||||||.|||.:|||:.||..|:||||||:|:|
 Worm   128 FETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEY 192

  Fly   229 LCKLLLERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMDLHGKVETYELPDGQKIVLGCERFRC 293
            |..||...|.....|.|.|||||:||..||::::..| ::.:....:|.|||..||.:....||.
 Worm   193 LRVLLRREGYEFHRSNEFEIVREMKENACYLALDPTK-VENNSVKSSYALPDTTKIEISNSLFRA 256

  Fly   294 PEALFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAP 358
            ||.||:|.|:|.|..|:....:.||..||:|||:.:|:|||||||||:|:....|.|.::.::||
 Worm   257 PEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAP 321

  Fly   359 PSIRIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            ...:|:::||.:|....|.|||::|||.:|:.||:...|||::|::.:|::.|
 Worm   322 ADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arp53D	NP_477037.2	ACTIN	46..411	CDD:214592	176/366 (48%)
		NBD_sugar-kinase_HSP70_actin	47..411	CDD:302596	176/365 (48%)
arp-1	NP_497108.2	NBD_sugar-kinase_HSP70_actin	4..374	CDD:302596	178/373 (48%)
		ACTIN	8..374	CDD:214592	177/369 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D649708at2759
OrthoFinder	1	1.000	-	-		FOG0000057
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920