DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and ACTRT1

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_612146.1 Gene:ACTRT1 / 139741 HGNCID:24027 Length:376 Species:Homo sapiens


Alignment Length:373 Identity:166/373 - (44%)
Similarity:236/373 - (63%) Gaps:8/373 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 HA----AVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGIL 106
            ||    ||:.|||||:||||.|.|..||.|..|::|..: .||.|..:.....:|:.|..|...|
Human     5 HALDVPAVIFDNGSGLCKAGLSGEIGPRHVISSVLGHCK-FNVPLARLNQKYFVGQEALYKYEAL 68

  Fly   107 TLKYPIEHGMVKNWDEMEMVWQHTYEL-LRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVP 170
            .|.||||.|:|..||:||.:|:|.:|. |...|...|.|:||..|||::.|||:.|:|||.|.||
Human    69 HLHYPIERGLVTGWDDMEKLWKHLFERELGVKPSQQPVLMTEPSLNPREIREKLAEMMFETFSVP 133

  Fly   171 AFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLE 235
            .||::..||.:|||:....|:|||||||||.||||:||::||||..::.:||||:|::|.:||..
Human   134 GFYLSNHAVAALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFA 198

  Fly   236 RGVTMGTSAEREIVREIKEKLCYVSMNYAKEM-DLHGKV-ETYELPDGQKIVLGCERFRCPEALF 298
            .|........:.:|..|||||||:::...||: ...|:| ..|.||||..|..|.|.::.||.||
Human   199 SGFNFPCILNKAVVNNIKEKLCYIALEPEKELRKSRGEVLGAYRLPDGHVIHFGDELYQVPEVLF 263

  Fly   299 QPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRI 363
            .|..||....|:.:....||..||.|::..:||:||||||||:...:|.|.::::.::|.....|
Human   264 APDQLGIHSPGLSKMVSSSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQLASKGTPI 328

  Fly   364 KVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            |:.|||||.||.|.|.|::.|::||:.||:.|.:::|.|:::|.|:||
Human   329 KITASPDRCFSAWIGASIMTSMSSFKQMWVTSADFKEYGTSVVQRRCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 161/365 (44%)
ACTRT1NP_612146.1 ASKHA_NBD_actin_Arp-T1-3 10..367 CDD:466848 159/357 (45%)

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