DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and Arp1

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:XP_320908.2 Gene:Arp1 / 1281358 VectorBaseID:AGAMI1_013609 Length:376 Species:Anopheles gambiae


Alignment Length:365 Identity:181/365 - (49%)
Similarity:254/365 - (69%) Gaps:2/365 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPIE 113
            ||||||||:.||||:.:..|:..||:.:|||:|:.|:..::.||..:|..|...||:|:::||:|
Mosquito    12 VVIDNGSGMIKAGFAGDHIPKCRFPNYMGRPKHVRVMAGALEGDMFVGPKAEDYRGLLSIRYPME 76

  Fly   114 HGMVKNWDEMEMVWQHTY--ELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAV 176
            ||:|.:|::||.:|.:.|  :.|.....:.|.|||||||||:|||||..||.||.|.|||.:|::
Mosquito    77 HGIVTDWNDMEKIWTYIYSKDELSTFAEEHPVLLTEAPLNPRKNREKAAEIFFETFNVPALFVSM 141

  Fly   177 QAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMG 241
            |||||||||||..|:|:||||||||.|||:||||:||:.:|||:||||:|.||..|:.:.|.:..
Mosquito   142 QAVLSLYATGRVTGVVLDSGDGVTHAVPIFEGFAMPHSIMRVDIAGRDVTRYLKTLIRKEGFSFR 206

  Fly   242 TSAEREIVREIKEKLCYVSMNYAKEMDLHGKVETYELPDGQKIVLGCERFRCPEALFQPSLLGQE 306
            |:||.||||.||||:|.::.|..||..:..:...|.||||..:.:|...:|.||.||:|.:||:|
Mosquito   207 TTAEFEIVRSIKEKVCSLATNPLKEETVDTEKTKYVLPDGNVLEIGPACYRAPEVLFRPHMLGEE 271

  Fly   307 VMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNASPDR 371
            ..||||...:||...||||||.:|.|||||||:|:|:....|.|.::.:.....::|::.|..:|
Mosquito   272 CEGIHEVLIYSIQKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSEIRKHVAKDMKIRIAAPQER 336

  Fly   372 RFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            .:|.|.|||:||||.:|:.||:...|::|.|...:|||.|
Mosquito   337 IYSTWMGGSILASLDTFKKMWVSKREFDEDGQRAIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 177/358 (49%)
Arp1XP_320908.2 ASKHA_NBD_Arp1 9..375 CDD:466820 179/362 (49%)

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