DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and Acta2

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_031418.1 Gene:Acta2 / 11475 MGIID:87909 Length:377 Species:Mus musculus


Alignment Length:381 Identity:240/381 - (62%)
Similarity:295/381 - (77%) Gaps:9/381 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 MSSEVDSNSHHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAA 100
            |..|.||    .|:|.|||||:|||||:.:|.||||||||||||||..|::.....||.:|:.|.
Mouse     1 MCEEEDS----TALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 61

  Fly   101 RKRGILTLKYPIEHGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMF 164
            .||||||||||||||::.|||:||.:|.|: |..||..|.:.|.||||||||||.||||||:|||
Mouse    62 SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMF 126

  Fly   165 EHFQVPAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYL 229
            |.|.|||.|||:||||||||:|||.|||:||||||||.||||||:|||||.:|:|||||||||||
Mouse   127 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYL 191

  Fly   230 CKLLLERGVTMGTSAEREIVREIKEKLCYVSMNYAKEM----DLHGKVETYELPDGQKIVLGCER 290
            .|:|.|||.:..|:|||||||:||||||||::::..||    ......::|||||||.|.:|.||
Mouse   192 MKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNER 256

  Fly   291 FRCPEALFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTE 355
            |||||.|||||.:|.|..||||.|::||..||:|:|||:|||.||||||||:..|..|..:::|.
Mouse   257 FRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITA 321

  Fly   356 MAPPSIRIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            :||.:::||:.|.|:|::|||.|||:||||::||.|||...||:|.|.:|||||||
Mouse   322 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 234/369 (63%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 234/368 (64%)
Acta2NP_031418.1 PTZ00281 3..377 CDD:173506 237/377 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54227
OrthoDB 1 1.010 - - D283838at33208
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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