DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and Actl7b

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_079547.2 Gene:Actl7b / 11471 MGIID:1343053 Length:418 Species:Mus musculus


Alignment Length:377 Identity:152/377 - (40%)
Similarity:223/377 - (59%) Gaps:25/377 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 AVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGD----SVIGEAAARKRGILTL 108
            |:|||.||..||.|::.|..|.....|.||: |...:..|:  ||    :.:|.........|.|
Mouse    53 ALVIDLGSQYCKCGYAGEPRPTYFISSTVGK-RSAEMAADA--GDNFKETYVGHELLNMEASLKL 114

  Fly   109 KYPIEHGMVKNWDEMEMVWQHTYE-LLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAF 172
            ..|::||:|.:||.::.:|::.:. .::..|.:...|:::.||:|..||||..|::||.|.:||.
Mouse   115 VNPLKHGVVVDWDCIQNIWEYIFHTAMKIMPEEHAVLVSDPPLSPTSNREKYAELLFETFGIPAM 179

  Fly   173 YVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERG 237
            :|..||:||:|:.|:|.|:||:||.||:|.|||.||..||....|||.||.|||:||.:||.|.|
Mouse   180 HVTSQALLSIYSYGKTSGLVVESGHGVSHVVPISEGDLLPGLPSRVDYAGCDLTNYLMQLLNEAG 244

  Fly   238 VTMGTSAEREIVREIKEKLCYVSMNYAKEM-----DLHGKVETYELPDGQKIVLGCERFRCPEAL 297
            ... :.....|:..||:|.||.::...:||     :||   ..||||||:.|.:|.|||||.|.|
Mouse   245 HKF-SDDHLHIIEHIKKKCCYAALLPEEEMSLGLDELH---VDYELPDGKIITIGQERFRCSEML 305

  Fly   298 FQPSLLGQEVMGIHEATHHSITNCD-MDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAP--- 358
            |:|||:|....|:.|.|...:..|. ...:::|.||::|.||.||......||.::|:.:.|   
Mouse   306 FKPSLVGCTQPGLPELTATCLARCQGTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLLCPGDS 370

  Fly   359 PSIRIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKC 410
            |:    |.|:|:|:.|||||||:||||.:||.:|:...|:||.|.|.::.||
Mouse   371 PT----VAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGCAAIYSKC 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 152/377 (40%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 152/377 (40%)
Actl7bNP_079547.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
ACTIN 52..418 CDD:214592 150/375 (40%)
NBD_sugar-kinase_HSP70_actin 53..418 CDD:302596 150/375 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

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