DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp53D and Actl7a

DIOPT Version :9

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_033741.1 Gene:Actl7a / 11470 MGIID:1343051 Length:440 Species:Mus musculus


Alignment Length:376 Identity:144/376 - (38%)
Similarity:220/376 - (58%) Gaps:23/376 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 AVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGD----SVIGEAAARKRGILTL 108
            |||:|.|:|.||.||:....|.....:.||:|    .:..:..||    :.:|.........|.|
Mouse    76 AVVVDLGTGFCKCGFAGLPKPTHKISTTVGKP----YMETAKTGDNRKETFVGHELFNPDIHLKL 136

  Fly   109 KYPIEHGMVKNWDEMEMVWQHTY-ELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAF 172
            ..|:.||::.:||.::.:|::.: :.::..|.:...|:::.||:|..||||..|::||.|..||.
Mouse   137 VNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFETFNTPAM 201

  Fly   173 YVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERG 237
            ::|.|:.||:|:.|||.|:||:.|.||::.||||||:.||....|:|.||.|||.||..|:...|
Mouse   202 HIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTTYLMNLMNNSG 266

  Fly   238 VTMGTSAEREIVREIKEKLCYVSMN-------YAKEMDLHGKVETYELPDGQKIVLGCERFRCPE 295
            ... :.....||.:||.:.|:|:::       .|.|.::|     |.||||::|.||.|||.|.|
Mouse   267 KHF-SEDHLGIVEDIKTRCCFVALDPIEEKKIPAPEHEIH-----YTLPDGKEIRLGQERFLCSE 325

  Fly   296 ALFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPS 360
            ..|:|||:....:|:|..|...:..||:.|::|:..||:|.||:||.|...:|..::|:.|.|..
Mouse   326 MFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLRGFPNRLQKELSSMCPND 390

  Fly   361 IRIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            .. :||..|:|..:||||||:||||..||.:|:..|||||.|...::|:||
Mouse   391 TP-QVNVLPERDTAVWTGGSILASLQGFQPLWVHRLEYEEHGPFFLYRRCF 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 142/374 (38%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 142/374 (38%)
Actl7aNP_033741.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
ACTL7A_N 6..70 CDD:293445
Required for interaction with TES. /evidence=ECO:0000250 36..56
NBD_sugar-kinase_HSP70_actin 72..440 CDD:302596 142/374 (38%)
ACTIN 74..440 CDD:214592 142/374 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.