DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and Actg1

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_033739.1 Gene:Actg1 / 11465 MGIID:87906 Length:375 Species:Mus musculus


Alignment Length:381 Identity:244/381 - (64%)
Similarity:297/381 - (77%) Gaps:11/381 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 MSSEVDSNSHHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAA 100
            |..|:      ||:|||||||:|||||:.:|.||||||||||||||..|::.....||.:|:.|.
Mouse     1 MEEEI------AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 59

  Fly   101 RKRGILTLKYPIEHGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMF 164
            .||||||||||||||:|.|||:||.:|.|| |..||..|.:.|.||||||||||.||||||:|||
Mouse    60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124

  Fly   165 EHFQVPAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYL 229
            |.|..||.|||:||||||||:|||.|||:|||||||||||||||:|||||.:|:|||||||||||
Mouse   125 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYL 189

  Fly   230 CKLLLERGVTMGTSAEREIVREIKEKLCYVSMNYAKEM----DLHGKVETYELPDGQKIVLGCER 290
            .|:|.|||.:..|:|||||||:||||||||::::.:||    ......::|||||||.|.:|.||
Mouse   190 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNER 254

  Fly   291 FRCPEALFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTE 355
            |||||||||||.||.|..||||.|.:||..||:|:|||:|||.||||||||:..|..|..:::|.
Mouse   255 FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 319

  Fly   356 MAPPSIRIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            :||.:::||:.|.|:|::|||.|||:||||::||.|||...||:|.|.:|||||||
Mouse   320 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 235/363 (65%)
Actg1NP_033739.1 ASKHA_NBD_actin 6..370 CDD:466823 235/363 (65%)

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