DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp53D and Acta1

DIOPT Version :10

Sequence 1:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_033736.1 Gene:Acta1 / 11459 MGIID:87902 Length:377 Species:Mus musculus


Alignment Length:369 Identity:235/369 - (63%)
Similarity:290/369 - (78%) Gaps:5/369 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 AVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLDSVIGDSVIGEAAARKRGILTLKYPI 112
            |:|.|||||:.||||:.:|.||||||||||||||..|::.....||.:|:.|..|||||||||||
Mouse     9 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 73

  Fly   113 EHGMVKNWDEMEMVWQHT-YELLRADPMDLPALLTEAPLNPKKNREKMTEIMFEHFQVPAFYVAV 176
            |||::.|||:||.:|.|| |..||..|.:.|.||||||||||.||||||:||||.|.|||.|||:
Mouse    74 EHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI 138

  Fly   177 QAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMG 241
            ||||||||:|||.|||:||||||||.||||||:|||||.:|:|||||||||||.|:|.|||.:..
Mouse   139 QAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFV 203

  Fly   242 TSAEREIVREIKEKLCYVSMNYAKEM----DLHGKVETYELPDGQKIVLGCERFRCPEALFQPSL 302
            |:|||||||:||||||||::::..||    ......::|||||||.|.:|.|||||||.|||||.
Mouse   204 TTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSF 268

  Fly   303 LGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNA 367
            :|.|..||||.|::||..||:|:|||:|||.|:||||||:..|..|..:::|.:||.:::||:.|
Mouse   269 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIA 333

  Fly   368 SPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 411
            .|:|::|||.|||:||||::||.|||...||:|.|.:|||||||
Mouse   334 PPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 228/362 (63%)
Acta1NP_033736.1 ASKHA_NBD_actin 8..372 CDD:466823 228/362 (63%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 112..125 10/12 (83%)
Interaction with alpha-actinin. /evidence=ECO:0000250|UniProtKB:P68135 360..372 4/11 (36%)

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