DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sod2 and SPAC1486.01

DIOPT Version :9

Sequence 1:NP_001286503.1 Gene:Sod2 / 36878 FlyBaseID:FBgn0010213 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_594089.1 Gene:SPAC1486.01 / 2542886 PomBaseID:SPAC1486.01 Length:218 Species:Schizosaccharomyces pombe


Alignment Length:219 Identity:102/219 - (46%)
Similarity:135/219 - (61%) Gaps:20/219 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RKISQTASLAVRG---------KHTLPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEE 60
            |.:|:.:..|:|.         |.|||.|||.|.||||.:...||:|||.|||||||||||||:|
pombe     3 RFLSKNSVAAIRNVSIARGVHTKATLPPLPYAYNALEPALSETIMKLHHDKHHQTYVNNLNAAQE 67

  Fly    61 QLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLSPNKT---QP--SDDLKKAIESQWKSL 120
            :|  |....|....:.|..|::|||||||||::||:.|:|.|.   :|  |..|.|||.|:|.||
pombe    68 KL--ADPNLDLEGEVALQAAIKFNGGGHINHSLFWKILAPQKEGGGKPVTSGSLHKAITSKWGSL 130

  Fly   121 EEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQDPLEASTGLIPLFGIDVWEHAYYLQY 185
            |:|:||:.....::|||||.|| ...|.|.|::....|||.:..|.   |:.|||.||||||.||
pombe   131 EDFQKEMNAALASIQGSGWAWL-IVDKDGSLRITTTANQDTIVKSK---PIIGIDAWEHAYYPQY 191

  Fly   186 KNVRPSYVEAIWDIANWDDISCRF 209
            :|.:..|.:|||::.||.:...|:
pombe   192 ENRKAEYFKAIWNVINWKEAESRY 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sod2NP_001286503.1 SodA 16..214 CDD:223678 99/208 (48%)
Sod_Fe_N 18..99 CDD:278509 47/80 (59%)
Sod_Fe_C 105..208 CDD:280872 47/104 (45%)
SPAC1486.01NP_594089.1 SodA 23..218 CDD:223678 98/199 (49%)
Sod_Fe_N 27..104 CDD:278509 46/78 (59%)
Sod_Fe_C 116..214 CDD:280872 46/101 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 100 1.000 Domainoid score I1819
eggNOG 1 0.900 - - E1_COG0605
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H530
Inparanoid 1 1.050 198 1.000 Inparanoid score I1006
OMA 1 1.010 - - QHG62294
OrthoFinder 1 1.000 - - FOG0002017
OrthoInspector 1 1.000 - - oto101146
orthoMCL 1 0.900 - - OOG6_100280
Panther 1 1.100 - - LDO PTHR11404
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1373
SonicParanoid 1 1.000 - - X1932
TreeFam 1 0.960 - -
1312.950

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