DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5348 and CG34162

DIOPT Version :9

Sequence 1:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001097149.2 Gene:CG34162 / 5740392 FlyBaseID:FBgn0085191 Length:535 Species:Drosophila melanogaster


Alignment Length:645 Identity:120/645 - (18%)
Similarity:215/645 - (33%) Gaps:216/645 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ERCEFVQKAEDCNSSTNVIPYMRLLACDLKCINQFQEMIFIALFVAFCFQILVLLIYTINVYYSP 107
            :.|...:....|.|...:|.|:.:..|..|    ...|....|..||...:.:.:::.:..|:  
  Fly    24 QTCGLARSTLSCGSLVYLINYLDICFCVFK----LPTMSIYGLISAFLLMVHLSVLFMVTKYF-- 82

  Fly   108 ALKAVSRFLHMNEHLAGVTLMAFGNTSADFFANLASVERHVPVFANNLSSALFVITISGGLIFYI 172
                                         |..|||::....|:.....|..||      |..|::
  Fly    83 -----------------------------FVPNLATLIEFAPMTMFGSSFLLF------GPTFFV 112

  Fly   173 SPFKMNSYETVRD--------ILFLLLATLLMDYFAYTTNHF----ALGYE---------FKFFI 216
            |.:  ||:..:.:        :..|..|.::.|...|....|    |.||.         ..|.:
  Fly   113 SYY--NSFWEICNPRKPESICLSPLQFAKIMGDILRYIVIGFMVICAQGYRVDGITFWSCLSFIL 175

  Fly   217 VLLVYISYIIIN--------VADVY----------------LLQKTIASTRTKMQKLLDEKQTPE 257
            ..:||: ||:|.        |||:|                ||...:.|.....:..:..|||.|
  Fly   176 TGMVYL-YIVIKKSYNVYLIVADLYSIKFRVTVFLYTFLMVLLVIFVVSYANFQRSKVKSKQTQE 239

  Fly   258 IALKLQDLERKLEYYSQDTRVEILEKSSSISITRIRYTTMRMIRNPRVSVNRRYTRNMKLDYTQS 322
                        .:...|:..|||.|                           |.:.|:...   
  Fly   240 ------------NFLEMDSGDEILGK---------------------------YQKQMEFSR--- 262

  Fly   323 KNQGIFRDFFL-ALRPIKCQAWKQAELLNRVLLLIRAPAVVICTLYIPLVDYEMEKHGWNKLLNA 386
                  |:.:| |:...:..|  .:.::.|:.::   |:..:...:||::..:....||||..:.
  Fly   263 ------REIWLKAVNGYRNMA--DSNVIYRIAMI---PSYFVLANFIPVISNDRALIGWNKYTSC 316

  Fly   387 INVVVNPAL-------SISIFLSFMHRKGNFLWYISLQNTLIYGASSFVLTVPFAVFILFHARTD 444
            :.:...|.:       ::|..:.|:     ..|.:|            :||     ||..|:.. 
  Fly   317 LGLFFLPIICLPHGFKAVSWLIMFL-----TCWTLS------------ILT-----FISTHSLR- 358

  Fly   445 VPPSYHWVFTIMNLTGSMFLIFLCATEIDTVL--------EVIGNILSIDDNYMGATV------- 494
             .|:..|:|.::.|..|...|.|.:.||:.::        :|:.::.::....:|..:       
  Fly   359 -RPNNIWIFALLGLIVSSVFINLLSREIENIIYQYISMQFDVMPDVTALVYFGLGEMLSESIVVR 422

  Fly   495 -----KAFTGNLGTLFANTAVAIH-GYPKMAFASAIGGSFFTIVVTGNTVAYVRSLVGNRSEHHM 553
                 |.:....|.:.:....||. .:|.:.|....... .:|:||.:|..              
  Fly   423 CLQQRKMWDATFGVVMSLVTYAIFLAFPLLFFQGCYNNK-CSIMVTSSTET-------------- 472

  Fly   554 EEYGEIAFIFLNMALFTILLWSTTLGFFARRSMGLYSIGLYVVYLLFVTLVHEEVIHSFS 613
                .|.||||  .|.|.||..:..|:..|.|:..|.:.|.|.|:....:.|.:.|.||:
  Fly   473 ----TIHFIFL--VLSTCLLHVSLSGYEFRISLLFYLLVLTVFYVTLQWMTHYDWILSFA 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:279963 16/107 (15%)
Na_Ca_ex 458..603 CDD:279963 34/165 (21%)
CG34162NP_001097149.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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