DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5348 and slc24a5

DIOPT Version :9

Sequence 1:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001025451.1 Gene:slc24a5 / 570312 ZFINID:ZDB-GENE-031210-1 Length:513 Species:Danio rerio


Alignment Length:594 Identity:109/594 - (18%)
Similarity:208/594 - (35%) Gaps:218/594 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 KCI----NQFQEMIF---------IALFVAFCFQILVLLIYTINVYYSPALKAVSRFLHMNEHLA 123
            :|:    ::|.|..|         |.::....|.:|:.:....:.|:.|:|:.:|..|.:::.:|
Zfish    57 ECVQPQSSEFPEGFFTVQERKDGGILIYFMIIFYMLLSVSIVCDEYFLPSLEVISERLGLSQDVA 121

  Fly   124 GVTLMAFGNTSADFFANLASVERHVPVFANNLSSALFVITISGGLIFYISPFKMNSYETVRDILF 188
            |.|.||.|:::.:.      |...:.||..  ...:.|.||.|..::              ::|.
Zfish   122 GATFMAAGSSAPEL------VTAFLGVFVT--KGDIGVSTIMGSAVY--------------NLLC 164

  Fly   189 LLLA--------------TLLMDYFAYTTNHFAL--------GYEFKFFIVLLVYISYIIINVAD 231
            :..|              .|..|..||..:..|:        .|.:....:||||..|:.:...|
Zfish   165 ICAACGLLSSAVGRLSCWPLFRDCVAYAISVAAVIAIISDNRVYWYDGACLLLVYGVYVAVLCFD 229

  Fly   232 VYLLQKTIASTRTKMQKLLDEKQTPEI-ALKLQDL----ERKLEYYSQDTRVEILEKSSSISITR 291
            :            ::.:.:.::.:|.. .||.:|.    ::.|..:|.|:.:.:           
Zfish   230 L------------RISEYVMQRFSPCCWCLKPRDRDSGEQQPLVGWSDDSSLRV----------- 271

  Fly   292 IRYTTMRMIRNPRVSVNRRYTRNMKLDYTQSKNQGIFRDFFLALRPIKCQAWKQAELLNRVLLLI 356
                             :|.:||         :.|||:|                          
Zfish   272 -----------------QRRSRN---------DSGIFQD-------------------------- 284

  Fly   357 RAPAVVICTLYIPLVDYEMEKHGWNKLLNAINVVVNPALSISIFLSFMHRKGNFLWYISLQ-NTL 420
                   .:.|..|   .:..||.|::.:...         |:|....|.....||.:||. :||
Zfish   285 -------DSGYSHL---SLSLHGLNEISDEHK---------SVFSMPDHDLKRILWVLSLPVSTL 330

  Fly   421 IYGASSFVLTVP-----------FAVFILFHARTDVPPSYHWV--FTIMNLTGSMFLIFLCATEI 472
            ::      ::||           ...|::         |..|:  ||.:       |:::     
Zfish   331 LF------VSVPDCRRPFWKNFYMLTFLM---------SAVWISAFTYV-------LVWM----- 368

  Fly   473 DTVLEVIGNILSIDDNYMGATVKAFTGNLGTLFANTAVAIHGYPKMAFASAIGGSFFTIVVTGNT 537
               :.::|..|.|.|..||.|:.|...::....|:..||..|...||.::.:|.:.|.::..| .
Zfish   369 ---VTIVGETLGIPDTVMGMTLLAAGTSIPDTVASVMVAREGKSDMAMSNIVGSNVFDMLCLG-L 429

  Fly   538 VAYVRSL---VGNRSEHHMEEYGEIAFIFLNMALFTILLWSTTLGFFARRSMGL---YSIGLYVV 596
            ..:::::   ||:     ..|......:|::..    ||.|....|.|....|.   :.:||..:
Zfish   430 PWFIQTVFVDVGS-----PVEVNSSGLVFMSCT----LLLSIIFLFLAVHINGWKLNWKLGLVCL 485

  Fly   597 --YLLFVTL 603
              |:||.||
Zfish   486 ACYILFATL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:279963 20/99 (20%)
Na_Ca_ex 458..603 CDD:279963 33/152 (22%)
slc24a5NP_001025451.1 ECM27 81..497 CDD:223604 105/570 (18%)
Na_Ca_ex 84..228 CDD:279963 33/165 (20%)
Na_Ca_ex 346..497 CDD:279963 40/183 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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