DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5348 and slc24a1

DIOPT Version :9

Sequence 1:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_009291877.2 Gene:slc24a1 / 558299 ZFINID:ZDB-GENE-060503-191 Length:741 Species:Danio rerio


Alignment Length:687 Identity:120/687 - (17%)
Similarity:233/687 - (33%) Gaps:239/687 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PYMRLLACDLKCINQFQEMIF---------IALFVAFCFQILVLLIYTINVYYSPALKAVSRFLH 117
            |:|:         .::.|.||         ::|.:.....:.|.|....:.::.|.|..::..|.
Zfish   149 PHMK---------GEYPEDIFSIEDRRKGWVSLHIFGMVYMFVSLAIVCDEFFVPTLGVITDKLA 204

  Fly   118 MNEHLAGVTLMAFGNTSADFFANLASVERHVPVFANN--------LSSALFVITISGGL--IFYI 172
            :::.:||.|.||.|.::.:.|.:|      :.||.::        :.||:|.|....|:  :|..
Zfish   205 ISDDVAGATFMAAGGSAPELFTSL------IGVFISHSNVGIGTIVGSAVFNILFVIGMCALFSR 263

  Fly   173 SPFKMNSYETVRDILFLLLATLLMDYFAYTTNHFALGYEFKFFI-VLLVYISYIIINVADVYLLQ 236
            ....:..:...||:.|.:|..:::  ..:..::..:.:|....: ...:|::::..||.    |:
Zfish   264 EMLHLTWWPLFRDVSFYILDLIML--IIFFLDNTIMWWESMMLVGGYALYVTFMKFNVQ----LE 322

  Fly   237 KTIASTRTKMQKLL----------------DEKQTPE----IALKLQ-DLER---KLEYYSQDTR 277
            :...|..:|.:.::                :|.:.||    ..|||: .|:|   ....::...|
Zfish   323 RAFKSQLSKHKSIVKVIAVEEPEKDNGTSGEENRPPEPEDKNRLKLKPTLQRGGSSASLHNSTMR 387

  Fly   278 VEILE-------------------KSSSISITRIRYTTMRMIRNPRVSVNRRYTRNMKLDYT--- 320
            ..|.:                   |:.|....::::.....|.|   .:.|....|.|.:.:   
Zfish   388 NTIFQLMIHTLDPLGEESVFNGDAKARSSLECKVKFKDKAQILN---DMARGKVENKKKEKSGEG 449

  Fly   321 -----QSK--------------NQGIFRDFFLALRPIKCQAWKQAELLNRVLLLIRAPAVVICTL 366
                 |:|              ||             |.:|.|                      
Zfish   450 DDQSEQTKDSKDAPPGAKDEDTNQ-------------KSEAQK---------------------- 479

  Fly   367 YIPLVDYEMEKHGWNKLLNAINVVVNPALS----------------------------------- 396
                 |.::...|.::         ||..|                                   
Zfish   480 -----DGDIAAGGGSE---------NPGGSDNSGDDDEDDSDEESDDDDDDDDDDDDDDDENEDE 530

  Fly   397 --------ISIFLSFMHRKGNFLWYISLQNTLIYGASSFVLTVPFAVFILFHARTDVPPSYHWVF 453
                    :|:......||         |.|.:     |:|.:   ||.|:....||.......|
Zfish   531 AGEDGDEPLSLEWPDTRRK---------QATYL-----FLLPI---VFPLWLTVPDVRNPASKKF 578

  Fly   454 TIMNLTGSMFLIFLCATEIDTVLEVIGNILSIDDNYMGATVKAFTGNLGTLFANTAVAIHGYPKM 518
            .::...||:..|.:.:..:......:|..:.|.:..||.|:.|...::..|..:..||..|...|
Zfish   579 FVITFLGSIVWIAIFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDM 643

  Fly   519 AFASAIGGSFFTIVVTGNTVAYVR-SLVGNRSEHHMEEYG---EIAFIFLNMALFTIL-----LW 574
            |.:|::|.:.|.|.: |..|.::. |...:.:...:...|   .|..:|| |.||.|:     .|
Zfish   644 AVSSSVGSNIFDITM-GLPVPWLMFSFFHSFAPVPVSSNGLFCAIVLLFL-MLLFVIISIAACKW 706

  Fly   575 --STTLGFFARRSMGLYSIGLYVVYLLFVTLVHEEVI 609
              :..|||    :|.:    ||.|:|:...::.:.:|
Zfish   707 RMNKVLGF----TMFI----LYFVFLVLSVMLEDRII 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:279963 22/109 (20%)
Na_Ca_ex 458..603 CDD:279963 39/155 (25%)
slc24a1XP_009291877.2 Na_Ca_ex <112..741 CDD:332332 120/687 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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