DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5348 and Nckx30C

DIOPT Version :9

Sequence 1:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_652011.3 Gene:Nckx30C / 45248 FlyBaseID:FBgn0028704 Length:881 Species:Drosophila melanogaster


Alignment Length:653 Identity:121/653 - (18%)
Similarity:213/653 - (32%) Gaps:197/653 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NSSTNVIPYMRLLACDLKCINQFQEMIFIALFVAFCFQILVLLIYTINVYYSPALKAVSRFLHMN 119
            ||:|...|   |...||....|.:....|...:...:..:.|.| ..:.::.|:|..:...|.:.
  Fly   309 NSTTTKTP---LFPKDLFTKEQLENGAVILHIIGVIYMFVALAI-VCDEFFVPSLDVIIEKLGIT 369

  Fly   120 EHLAGVTLMAFGNTSADFFANLASVERHVPVFAN--------NLSSALFVITISGGL--IFYISP 174
            :.:||.|.||.|.::.:.|.::      :.||.:        .:.||:|.|....|:  :|..:.
  Fly   370 DDVAGATFMAAGGSAPELFTSV------IGVFVSFDDVGIGTIVGSAVFNILFVIGMCALFSKTV 428

  Fly   175 FKMNSYETVRDILFLLLATLLMDYFAYTTNHFALGYEFKFFIVLLVYISYIIINVADVYLLQKTI 239
            ..:..:...||..|..::.|::.|| :..|..   :.::..|:..:||.|:        ...|..
  Fly   429 LSLTWWPLFRDCSFYSISLLVLIYF-FRDNRI---FWWEALILFTIYIGYV--------AFMKWN 481

  Fly   240 ASTRTKMQKLLDEKQTPEIALKLQDLERKLEYYSQDTRVEILEKSSSISITRIRYTTM------- 297
            ....|.::|::.:.:                                  :||:|.|..       
  Fly   482 VQVETCVKKMITKNK----------------------------------VTRVRSTDQLMPAGNA 512

  Fly   298 ------RMIRNPRVSVNRRYTRNMKLDYTQSKNQGI-------------------FRDFFLALRP 337
                  .|...|..||..|.....:.....|.|.|.                   ||...|.|..
  Fly   513 ANSSETSMATQPGGSVTSRAASETRSGPPGSSNAGATGNSSGGGGTSGSTQTGAKFRHGLLQLMI 577

  Fly   338 IKCQAWKQAELLNRVLLLIRAPAVVICTLYIPLVDYEMEKHGWNKLLNAINVVVN---------- 392
            .........::..:...|     ..|.:|.: |:|....:.|......|.:|.:|          
  Fly   578 HTIDPLHDGKVDEKATQL-----HAIASLKV-LLDATKPQRGGATTSAANHVKINLKETTLADRP 636

  Fly   393 ----------PALS------ISIFLSFMHRKG--------------NFLWYISLQNTLIYGASSF 427
                      |:||      |...:....||.              :..|..:.:..|.|     
  Fly   637 NGNIDTTLDSPSLSGRRPSWIEQRVKIQTRKFSIKAPEIEDEPEPLSMAWPDTARKRLTY----- 696

  Fly   428 VLTVPFAV---FILFHARTDVPPSYHWVFTIMNLTGSMFLIFLCATEIDTV--LEVIGNILSIDD 487
            ||..|..|   ..|...||   |.....|.: ...||  ::::.|.....|  ..|.|:...|..
  Fly   697 VLVAPLLVPMWLTLPDTRT---PRGKRFFPV-TFIGS--IVWIAAFSYLMVWWANVAGDTARIPP 755

  Fly   488 NYMGATVKAFTGNLGTLFANTAVAIHGYPKMAFASAIGGSFFTI------------VVTG----- 535
            ..||.|..|...::..|..:..||..|:..||.:|::|.:.|.:            ::.|     
  Fly   756 EVMGLTFLAAGTSIPDLITSVIVARKGFGDMAVSSSVGSNIFDVTVGLPIPWLLYGIIYGAPVEV 820

  Fly   536 NTVAYVRSLVGNRSEHHMEEYGEIAFIFLNMALFTILLWSTTLGFFARRSMGLYSIGLYVVYLLF 600
            |:|..|.|:.        ..:..:.|:.:::|.|.   |        |.:.|| ...::::|..|
  Fly   821 NSVGMVCSIT--------ILFMMLVFVVMSIACFR---W--------RMNKGL-GFTMFLLYFAF 865

  Fly   601 VTL 603
            |.:
  Fly   866 VAV 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:279963 21/109 (19%)
Na_Ca_ex 458..603 CDD:279963 35/163 (21%)
Nckx30CNP_652011.3 Na_Ca_ex 336..480 CDD:279963 31/162 (19%)
Na_Ca_ex 721..871 CDD:279963 36/171 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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