DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5348 and zyd

DIOPT Version :9

Sequence 1:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster


Alignment Length:618 Identity:119/618 - (19%)
Similarity:219/618 - (35%) Gaps:177/618 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LLACDLKC----INQFQEMIF---------IALFVAFCFQILVLLIYTINVYYSPALKAVSRFLH 117
            ||.|.:.|    |:.|...:|         :.|.|.....:.|.|....:.|:.||::.:...|:
  Fly    15 LLFCYINCTQPAIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALN 79

  Fly   118 MNEHLAGVTLMAFGNTSADFFANLASVERHVPVFANNLSSALFVITISGGLIFYISPFKMNSYET 182
            |:..:||.|.||...::.:.|.|:      :..|..  ...:.|.||.|..:|.|          
  Fly    80 MSNDVAGATFMAAATSAPELFVNV------IGTFIT--EGDIGVGTIVGSAVFNI---------- 126

  Fly   183 VRDILFLLLA---------TLLMDYFAYTTNHFALGYEFKFFIVLL------VYISYIIINVADV 232
                  |.:|         |:.:|::..|.:..|.|......|.::      .|.:.|::::..|
  Fly   127 ------LAVAACCGIGAGMTIPLDWWPLTRDSIAYGVTVAILICVMHDERVEWYEALILVSLYAV 185

  Fly   233 YL----LQKTI----------ASTRTKMQ------KLLDEKQTPE-----IALKLQDLERKLEYY 272
            ||    ..||.          |.:|::..      |..:||: ||     |...:.:::......
  Fly   186 YLAVMYFDKTFQKCAKGGVKQARSRSRSSNCSIHTKNSNEKE-PELVENRICQNMANIQLNGGLN 249

  Fly   273 SQDTRVEILEKSSSISITRIRYTTMRMIRNPRVSVNRRYTRNMKLDYTQSKNQGIFRDFFLALRP 337
            .:..:.   ..:|....|.|..||.              |....|..|.|...|           
  Fly   250 KEQAKA---TSTSGAGTTAISITTS--------------TMTTTLSTTHSAGGG----------- 286

  Fly   338 IKCQAWKQAELLNRVLLLIRAPAVVICTLYIPLVDYEMEKHGWNKLLNAINVVVNPA-------- 394
                        ...:.|...|..::  ...||.|.|.|.|          |.|..|        
  Fly   287 ------------GGAVGLCSGPGAIV--QMAPLDDAEAESH----------VAVAAADEGRKEEG 327

  Fly   395 LSISIFLSFMHRKGNFLWYISLQNTLIYGASSFVLTVPFAVFILFHARTDVP----PSYHWVFTI 455
            .|:   ||:...|..|              :.|...:.:.:.:||  |..:|    ...:.:|. 
  Fly   328 YSL---LSYPKDKSCF--------------AQFTWLIIWPIHLLF--RIAIPDCKKAKNNKIFP- 372

  Fly   456 MNLTGSMFLIFLCATE--IDTVLEVIGNILSIDDNYMGATVKAFTGNLGTLFANTAVAIHGYPKM 518
              ||..|.::::.:..  :..::.:||:.|.|.|:.||.|..|...::....::..||..|:..|
  Fly   373 --LTFIMCIVWIGSLSYVVAWMITIIGDTLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSM 435

  Fly   519 AFASAIGGSFFTIVVTGNTVAYVRSLVG--NRSEHHME------EYGEIAFIFLNMALFTILLWS 575
            ...::||.:.|.|::.......::::..  ...::::.      ||..|..:   ..||.:.|..
  Fly   436 GICNSIGSNTFDILLCLGVPWLIKAVFFPIQPGQNYVAINSAGLEYSAITLL---STLFLLYLTF 497

  Fly   576 TTLGFFARRSMGLYSIGLYVVYLLFVTLVHEEV 608
            :|..|...:.:|...:.:|:|:::|.:|:...|
  Fly   498 STNKFKLDKKVGTACLVMYLVFMVFASLIELNV 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:279963 22/99 (22%)
Na_Ca_ex 458..603 CDD:279963 32/154 (21%)
zydNP_001015261.3 ECM27 46..522 CDD:223604 109/577 (19%)
Na_Ca_ex 48..192 CDD:279963 35/167 (21%)
Na_Ca_ex 370..525 CDD:279963 33/160 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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