DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5348 and CG17167

DIOPT Version :9

Sequence 1:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001015257.2 Gene:CG17167 / 3354991 FlyBaseID:FBgn0039941 Length:522 Species:Drosophila melanogaster


Alignment Length:563 Identity:117/563 - (20%)
Similarity:210/563 - (37%) Gaps:156/563 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 DLKCINQF-QEMIFIALFVAFCFQILVLLIYTINVYYSPALKAVSRFLHMNEHLAGVTLMAFGNT 133
            ||..::|. |..:.:.:|.|..|.||:.:|  .|.|:.|.::.:...||:::.:|..|.||...:
  Fly    71 DLFTVDQLRQGWVVLHVFAAVYFFILLAII--CNDYFLPTVECICEDLHLSKDVAAATFMATATS 133

  Fly   134 SADFFANLASVERHVPVFANNLSSALFVITISGGLIFYI------------SPFKMNSYETVRDI 186
            ..:||.|..|        ...|.|.:.:.||.|.|:|..            .|.:::.:...||.
  Fly   134 MPEFFTNTIS--------TLILESDMGLGTIIGSLMFNTLGVAGLAALAIDKPVQLDWWPIARDC 190

  Fly   187 LFLLLATLLMDYFA------YTTNHFALGYEFKFFIVLL---VYISYIIINVADVYLLQKTIAST 242
            ...:..|:::...|      :|.:...:|:...::::..   .::..|.:.:.|   ......||
  Fly   191 FIYVFNTIILLVLAWSGSISFTESCIMMGFLILYYLITFNNNKFMPAIRVFIED---RMNCCFST 252

  Fly   243 RTKMQKLLDEKQTPEIALKLQDLERKLEYYSQDTR--VEILEKSSSISITRIRYTTMRMIRNPRV 305
            |      .|..:.||.:.|.| |..|.:..|.|..  :.:.|.:||:|.|               
  Fly   253 R------YDLTEPPENSAKAQ-LPLKKDPLSGDGLFVLNLPENTSSMSST--------------- 295

  Fly   306 SVNRRYTRNMKLDYTQSKNQGIFRDFFLALRPIKCQAWKQAELLNRVLLLIRAPAVVICTLYIPL 370
               ...|||..|:     ::....|                              ||..::|.  
  Fly   296 ---ANLTRNKHLN-----DEDDVAD------------------------------VVPGSIYA-- 320

  Fly   371 VDYEMEKHGWNKLLNAINVVVNPALSISIFLSFMHRKGNFLWYIS-LQNTLIYGASSFVLTVPFA 434
              |..:..||.:........:...||:.|.....:|:   |:.:| :...|..|.:::::.....
  Fly   321 --YPRDASGWMQFWWIFVFPIKVTLSLLIPHPMKYRR---LYPLSFIMCILCIGGNAYLIVWMLT 380

  Fly   435 VF-ILFHARTDVPPSYHWVFTIMNLTGSMFLIFLCATEIDTVLEVIGNILSIDDNYMGATVKAFT 498
            .| :..|..|          .:|.||      ||.|.  .|:.|.:.:::|:.:...|..|   :
  Fly   381 AFGVAIHVPT----------IVMGLT------FLAAG--STMPEAVSSLISLRNGENGIGV---S 424

  Fly   499 GNLGTLFANTAVAIHGYPKMAFASAIGGSFFTIVVTGNTVAY---VRSLVGNRSEHHMEEYGEIA 560
            .:||   ||:         :|...::|..:|    ..|.:.|   ....||.:.    .||..:.
  Fly   425 NSLG---ANS---------LAILLSLGVPWF----IKNCIHYGTGEPQQVGTQG----IEYNILI 469

  Fly   561 FIFLNMALFTILLWSTTLGFFARRSMGLYSIGLYVVYLLFVTL 603
            .|...||||.||.:|   |:...:.:|   :.|:.||.:|:.|
  Fly   470 LIISTMALFIILSFS---GYRLTKRVG---VALFTVYGVFIVL 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:279963 28/111 (25%)
Na_Ca_ex 458..603 CDD:279963 37/147 (25%)
CG17167NP_001015257.2 TIGR00367 85..503 CDD:273039 111/544 (20%)
Na_Ca_ex 86..229 CDD:279963 33/152 (22%)
Na_Ca_ex 356..509 CDD:279963 46/198 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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