DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5348 and CG12061

DIOPT Version :9

Sequence 1:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001104467.2 Gene:CG12061 / 3354990 FlyBaseID:FBgn0040031 Length:441 Species:Drosophila melanogaster


Alignment Length:574 Identity:111/574 - (19%)
Similarity:197/574 - (34%) Gaps:197/574 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CDLKCINQFQEMI----FIALFVA--FCFQILVLLIYTINVYYSPALKAVSRFLHMNEHLAGVTL 127
            |.|..|.:|..::    :||:.|:  ....:.|:|....:.|..||::.:...|.|...:||.|.
  Fly    37 CTLPAIVEFPNLMRQKSWIAIVVSTLVSMYLFVILAIVCDDYLVPAMERLCYTLRMTYDVAGATF 101

  Fly   128 MAFGNTSADFFANLASVERHVPVFANN--------LSSALF-VITISGGLIFYISPFKMNSYETV 183
            :|...::.:.|.|.      |..|..|        :.|::| ::.|:|....:..|.|::.:...
  Fly   102 LAASTSAPELFVNF------VGTFVTNGDIGLGTIVGSSVFNILVIAGVCGIFTQPTKLDWWPVT 160

  Fly   184 RDILFLLLATLLMDYFAYTTNHFALGYEFKFFIVLLVYISYIIINVADVYLLQKTIASTRTKMQK 248
            ||..:.|:|...:.|..:  :...:.||  .|.:||:||||:|                    |.
  Fly   161 RDTAWYLIAIASLTYVLW--DSLVMWYE--AFALLLLYISYVI--------------------QL 201

  Fly   249 LLDEKQTPEIALKLQDLERKLEYYSQDTRVEILEKSSSISITRIRYTTMRMIRNPRVSVNRRYTR 313
            ..|.        ::|:|.|     .:....|:|::.   .:||                      
  Fly   202 SFDR--------RIQNLVR-----HEHAESELLDED---PMTR---------------------- 228

  Fly   314 NMKLDYTQSKNQGIFRDFFLALRPIKCQAWKQAELLNRVLLLIRAPAVVICTLYIPLVDYEMEKH 378
                  .:...:| |||.                               :|..  |..:|...:.
  Fly   229 ------EEEPLKG-FRDH-------------------------------VCAK--PKTEYNFYQW 253

  Fly   379 GWNKLLNAINVVVNPALSISIFLSFMHRKGNFLWYISLQNTLIYGASSFVLTVPFAVFILFHART 443
            .|                               |.|.....|:     ...|||.|..|.|    
  Fly   254 TW-------------------------------WAIKYPAELM-----LACTVPSARSIFF---- 278

  Fly   444 DVPPSYHWVFTIMNLTGSMFLIFLCATEIDTVLEVIGNILSIDDNYMGATVKAFTGNLGTLFANT 508
                        :::..::..|.|.:..:...|.::|..|:|.|..||.||.|...::..:.::.
  Fly   279 ------------LSMISAILWISLISYLLTWFLTILGYNLNIPDAIMGLTVLAAGTSVPEVASSY 331

  Fly   509 AVAIHGYPKMAFASAIGGSFFTIVVTGNTVAYVRSLVGNRSEHHMEEYGEIAFIFLNMALFTILL 573
            .|:..||..||..:|||.:.|.|:|.......::.|:..:         :|......:.:.|.:|
  Fly   332 IVSKKGYGSMAICNAIGSNTFDILVCLGLPWLLKILIYQQ---------KIDIDSTALTITTAML 387

  Fly   574 WSTT----LGFFARR-----SMGLYSIGLYVVYLLFV----TLVHEEVIHSFSD 614
            ..|.    ||..|||     ::|..||..|.::|:..    .|:::|.:....|
  Fly   388 VVTAAVLYLGLLARRFVMGKTVGYLSIIFYALFLIIACTLEILLNKEKMCDIQD 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:279963 24/110 (22%)
Na_Ca_ex 458..603 CDD:279963 38/157 (24%)
CG12061NP_001104467.2 TIGR00367 61..422 CDD:273039 100/529 (19%)
Na_Ca_ex 62..199 CDD:279963 36/146 (25%)
Na_Ca_ex 276..424 CDD:279963 40/172 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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