DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5348 and ncx-5

DIOPT Version :9

Sequence 1:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_505690.2 Gene:ncx-5 / 191715 WormBaseID:WBGene00003570 Length:656 Species:Caenorhabditis elegans


Alignment Length:576 Identity:117/576 - (20%)
Similarity:199/576 - (34%) Gaps:154/576 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 FPFEERCEFVQKAEDCNSSTNVIPYMRLLACDLKCINQFQEMIF---------IALFVAFCFQIL 94
            :.|::....:|...:.|||                  ||...||         :.:.:.....:.
 Worm    64 YEFDDCRPRIQTTSNANSS------------------QFPADIFSLQTRRRGGVIVHIGLLIYMF 110

  Fly    95 VLLIYTINVYYSPALKAVSRFLHMNEHLAGVTLMAFGNTSADFFANLASVERHVPVFANNLSSAL 159
            |.|....:.::.|:|..::..|.:::.:||.|.||.|.::.:||.:|..|.    |..:|:.   
 Worm   111 VALAVVCDEFFVPSLSVITEVLAISDDVAGATFMAAGGSAPEFFTSLFGVF----VAQDNVG--- 168

  Fly   160 FVITISGGLIFYISPFKMNSYETV--RDILFLLLATLLMDYFAYTTNHFALGYEF--------KF 214
             |.||.|...|.|  ..:.::.|:  |.:|.|....|..|...||.:.|.|...|        :.
 Worm   169 -VGTIVGSATFNI--LCVLAFCTLFSRQVLHLTWWPLFRDMSFYTLSLFLLLIFFGDEVIEWQEA 230

  Fly   215 FIVLLVYISY--------IIINVADVYLLQKTIASTRTKMQKLLDEKQ--TPEI--ALKLQDLER 267
            .::..:||:|        .:......:|.:|....:....:.::|...  ||..  :|..|...|
 Worm   231 LVMFSMYIAYGFFMKFNGFLELKTKQFLFRKVGIGSEIAPETIVDAAAGCTPRSPHSLGAQGPRR 295

  Fly   268 K--LEYYSQDTRVEILE---------KSSSISITRIRYTTMRMIRN--PRVSVNRRYTRNMKLDY 319
            .  :.:..|:.|..|.:         .|||.|.:..|...::.:.|  |.:..|.|.......:.
 Worm   296 SFPMIHGGQEVRKSIAQLVIGDEDDTSSSSSSSSSERSNKIKPVSNGVPEIRQNGRTIMVKPAND 360

  Fly   320 TQSK--NQGIFRDFFLALRPIKCQAWKQAELLNRVLLLIRAPAVVICTLYIPLVDY--------- 373
            ..:|  ||...:                                   |:..| :|:         
 Worm   361 PDAKFNNQNSIK-----------------------------------TVITP-IDFGDDHTIVIN 389

  Fly   374 ----EMEKHGWNKLLNAINVVVNPALSISIFLSFMHRKGNFLWYISLQNTLIYGASSFV-----L 429
                ...|:|.|.........:||:   :..|......||.:..|:|.|..|  |||..     |
 Worm   390 NNNNGKRKNGNNGTYLTPVEAINPS---NGHLELAQTNGNPVPPIALDNLSI--ASSTAEKPLDL 449

  Fly   430 TVPFA----VFILFHARTDVPPSYHWVFTIMNLTGSMFLIFLCATEIDTVL-------------E 477
            :.|.|    :..||.|    |.::...:|:.::.......|...|.|..:|             .
 Worm   450 SWPEANHKKLIYLFLA----PITFPLAYTLPDVRKPSLRKFFAITFIGAILWIAAYSYLMVWWAN 510

  Fly   478 VIGNILSIDDNYMGATVKAFTGNLGTLFANTAVAIHGYPKMAFASAIGGSFFTIVV 533
            .||....|....||.|:.|...::..|..:..||..|...||.:|:||.:.|.:.|
 Worm   511 TIGETFGIPTEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNLFDVCV 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:279963 25/101 (25%)
Na_Ca_ex 458..603 CDD:279963 22/89 (25%)
ncx-5NP_505690.2 Na_Ca_ex 102..244 CDD:279963 37/151 (25%)
Na_Ca_ex 486..642 CDD:279963 22/81 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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