DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5348 and ncx-10

DIOPT Version :9

Sequence 1:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001256094.1 Gene:ncx-10 / 190821 WormBaseID:WBGene00003575 Length:668 Species:Caenorhabditis elegans


Alignment Length:665 Identity:131/665 - (19%)
Similarity:265/665 - (39%) Gaps:156/665 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CFAANNFPFEERCEFVQKAEDCNSSTNVIPYMRLLACDLKCINQFQEMIFIALFVAFCFQILVLL 97
            |....::..|:.|.:::..:|.......:.:...:.|:   .::...:|.|.:.:.:...:.|::
 Worm    57 CLIQKHWTREDTCAYIKCNKDACEGGGYLQWSEYIKCE---HSRSIRIILIIISIIYLLFLFVVM 118

  Fly    98 IYTINVYYSPALKAVSRFLHMNEHLAGVTLMAFGNTSADFFANLASV-----ERHVPVFANNLSS 157
            ....:.::||::..:.|.|.::|.:||||.:||||.:.|.|.::|||     .:......:.:..
 Worm   119 TVVADDFFSPSIAGIVRHLKISESIAGVTFLAFGNGAPDVFGSIASVITTPKPKADLAIGDIIGG 183

  Fly   158 ALFVITISGGLIFYISPFKMNSYETVRDILFLLLATLLMDYFAYTTNHFALGYEFKFFIVLLVYI 222
            .:||.|:....|.....|::....|:|||:|.::|.:.:..:..|.||..:.....|   |.:|.
 Worm   184 GIFVTTVVLSAIILTKSFRIAILATIRDIVFFIIADIFLAIWFLTFNHVEIWMPLTF---LGLYA 245

  Fly   223 SYIIINVADVYLLQKTIASTRTKMQKLLDEKQTPEIALKLQDLERKLEYYSQDTRVEILEKSSSI 287
            :|::                             ..|.::|....||   .::..::|...|.|::
 Worm   246 AYVV-----------------------------SVILMRLNSKRRK---RARHEKIENARKESAM 278

  Fly   288 SITRIRYTT-----------MRMIRNPRVSVNRRYTRNMK--------------LDYTQSKNQGI 327
            :....:.:|           :....|.::|   ..|.|:|              :|.| |.::|:
 Worm   279 NHHTHKISTFIGFFMDYAHVINFFANNKIS---SMTNNVKNFLDGKEDSLEDGLVDET-SDDEGV 339

  Fly   328 FRDF-----------------FLALRPIKCQAWKQAELLNRVLLLIR------------------ 357
            ..:|                 |..:..|:.:.||..|.:..|...:|                  
 Worm   340 EAEFHYAHRHVYKSYDEASLAFTDVEEIQPKTWKSWEWVRDVRNHLRPWPGNDEFYEMNYFSRFI 404

  Fly   358 APAVVICTLYIPLV--DYEMEKHGWNKLLNAINVVVNPALSISIFLSFMHRKGNF-----LWYIS 415
            ....||.|.::.|.  ..||.   |:|.:..|:...  ::.:::|...:..|..|     ||   
 Worm   405 TVVAVIPTFFLKLTIPSNEMP---WSKPILIIHCFC--SIQLALFAVQISAKSPFHGSPGLW--- 461

  Fly   416 LQNTLIYGASSFVLTVPFAVFILFHARTDVPPSYH-WVFTIMNLTGSMFLIFLCATEIDTVLEVI 479
                 :||   .::::..::..|.....|....|: .|::.:....|:..|:..::||..|:.:|
 Worm   462 -----LYG---LLISIILSLLALRFTPLDREQKYYREVYSYLGFLMSIAWIYTISSEIINVITMI 518

  Fly   480 GNILSIDDNYMGATVKAFTGNLGTLFANTAVAIHGYPKMAFASAIGGSFFT--------IVVTGN 536
            |....:....:|.|:.|::..:|.:.::.||...|:||||.|:||||..|:        |.:|  
 Worm   519 GVATGVSQEILGLTIMAWSNCIGDIVSDVAVVKQGFPKMAMAAAIGGPLFSKLYSRPCQIKIT-- 581

  Fly   537 TVAYVRSLV-------------GNRSEHHMEEYGEIAFIFLNMALFTILLWSTTLGFFARRSMGL 588
              .|:..|:             |.:.:..:.....:..:||.::|||.|:......|..|....:
 Worm   582 --TYISDLLIGFGLPFTIACLQGKQIDLIITPVYRLLMLFLAISLFTSLIAIFVQRFKVRWPHAV 644

  Fly   589 YSIGLYVVYLLFVTL 603
            ..:.::|.:|:||.|
 Worm   645 ALLTVFVAFLIFVLL 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:279963 26/104 (25%)
Na_Ca_ex 458..603 CDD:279963 41/165 (25%)
ncx-10NP_001256094.1 PLN03151 35..571 CDD:215604 113/571 (20%)
Na_Ca_ex 113..253 CDD:279963 37/171 (22%)
Na_Ca_ex 492..659 CDD:279963 41/170 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 75 1.000 Domainoid score I5893
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41602
Inparanoid 1 1.050 162 1.000 Inparanoid score I2840
Isobase 1 0.950 - 0 Normalized mean entropy S4675
OMA 1 1.010 - - QHG57812
OrthoDB 1 1.010 - - D257493at33208
OrthoFinder 1 1.000 - - FOG0000933
OrthoInspector 1 1.000 - - mtm4752
orthoMCL 1 0.900 - - OOG6_101277
Panther 1 1.100 - - O PTHR12266
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X612
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.930

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