DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5348 and slc24a4

DIOPT Version :9

Sequence 1:NP_611156.3 Gene:CG5348 / 36877 FlyBaseID:FBgn0034156 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_002933272.2 Gene:slc24a4 / 100489343 XenbaseID:XB-GENE-478288 Length:612 Species:Xenopus tropicalis


Alignment Length:619 Identity:127/619 - (20%)
Similarity:233/619 - (37%) Gaps:182/619 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CDLKCINQFQEMIF--------IALFVAFCFQILVLLIYTINV----YYSPALKAVSRFLHMNEH 121
            |....||:|.:.:|        ..||..||   .:.:.|.:.:    ::.|:|:.:...||::|.
 Frog    84 CTEPAINEFPDDLFSIKERQRGAVLFHIFC---ALYMFYALAIVCDDFFVPSLEKICEKLHLSED 145

  Fly   122 LAGVTLMAFGNTSADFFANLASVERHVPVFANN--------LSSALF----VITISGGLIFYISP 174
            :||.|.||.|:::.:.||::      :.||..:        :.||:|    :|.:.|  :|....
 Frog   146 VAGATFMAAGSSTPELFASV------IGVFITHGDVGVGTIVGSAVFNILCIIGVCG--VFAGQV 202

  Fly   175 FKMNSYETVRDILFLLLATLLMDYFAYTTNHFALGYEFKFFIVLLVYISYIIINVADVYLLQKTI 239
            .::..:...||.::.:::.|.:..|.|  :...:.:|  ..|::::|..||:            |
 Frog   203 VRLTWWSLFRDSMYYIISILALIIFIY--DEIIVWWE--SLILIVMYFFYIL------------I 251

  Fly   240 ASTRTKMQKLLDEKQTP----EIALKLQDLERKLEYYSQDTRVEILEKSSSISITRIRYTTMRMI 300
            ....||||:|...|:..    .:..:|||.....::...|..|.:|.|                 
 Frog   252 MKYNTKMQRLFTIKKNVGNGCPVGSELQDGNVYSDFVCDDPSVPLLWK----------------- 299

  Fly   301 RNPRVSVNRRYTRNMKLDYTQSKNQGIFRDFFLALRPIKCQAWKQAELLNRVLLLIRAPAVVICT 365
                |..:::|         .::|..:..|..:...|.|.: :.:|.|  |:::..:.|......
 Frog   300 ----VKASQQY---------YNRNSVVMVDEIICSSPPKYR-FPEAGL--RIMITNKFPPRTRLR 348

  Fly   366 LYIPLVDYEMEKHGWNKLLNAIN------------VVVNPALSISIFLSFM-HRKGNFLWYISLQ 417
            :...|:..|.:     :||::.|            ::.|..|.:.....:. ..:.|:|      
 Frog   349 MASRLIINERQ-----RLLHSANGTSTTTLDGKQELLENGGLHVDKADDYQEENEANYL------ 402

  Fly   418 NTLIYGASSFVLTVPFAVFILFHARTDVPPS-----YHWV----------FTIMNLTGSMFLIFL 467
                         |||:|           ||     :.|.          |||.|.:...:..|.
 Frog   403 -------------VPFSV-----------PSGCANIFKWAFSWPLICILYFTIPNCSKPRWENFF 443

  Fly   468 CATEIDTVL-------------EVIGNILSIDDNYMGATVKAFTGNLGTLFANTAVAIHGYPKMA 519
            ..|.|.:.|             .|||..|.|.|..||.|..|...::....|:..||..|...||
 Frog   444 MLTFITSTLWIAIFSYIMVWMVTVIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGLGDMA 508

  Fly   520 FASAIGGSFFTIVVTGNTVAYVRSLVGNRSEHHMEEYGEIAFIFLNMALFTI--LLWSTTL---G 579
            .:::||.:.|.|:|.......:::::.|        ||....|.....::::  ||.|..|   |
 Frog   509 VSNSIGSNVFDILVGLGVPWGLQTMIIN--------YGSTVKINSKGLVYSVILLLGSVALTVGG 565

  Fly   580 FFAR-----RSMGLYSIGLYVVYLLFVTLVHEEV 608
            .:..     :..|.|.:.||.::|.|..|:...|
 Frog   566 IYVNKWKLDKKFGFYVLFLYAIFLCFSVLIEYNV 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5348NP_611156.3 Na_Ca_ex 86..>186 CDD:279963 26/115 (23%)
Na_Ca_ex 458..603 CDD:279963 40/167 (24%)
slc24a4XP_002933272.2 2A1904 <91..596 CDD:273344 123/607 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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