DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-104 and AT1G55550

DIOPT Version :10

Sequence 1:NP_611155.3 Gene:unc-104 / 36876 FlyBaseID:FBgn0267002 Length:1739 Species:Drosophila melanogaster
Sequence 2:NP_564696.2 Gene:AT1G55550 / 842004 AraportID:AT1G55550 Length:859 Species:Arabidopsis thaliana


Alignment Length:807 Identity:209/807 - (25%)
Similarity:333/807 - (41%) Gaps:212/807 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVKVAVRVRPFNSREIARESKCIIEMAGATTAITNPKVPPNTSDS-----------VKRFNFDYS 56
            :::|..||:|..:.|..|                    ||..||:           .|.:|||..
plant    91 NIRVFCRVKPLGATEKLR--------------------PPVASDTRNVIIKLSETKRKTYNFDRV 135

  Fly    57 YWSHDHHDADFSTQSMVYKDIGEEMLQHSFDGYNVCIFAYGQTGAGKSYTMMGRQEEQQEGIIPM 121
            :...       |:|..|:.:| |.:::...||||.|||||||||.||:|||.|.  ....||:|.
plant   136 FQPD-------SSQDDVFLEI-EPVIKSVIDGYNACIFAYGQTGTGKTYTMEGL--PNSPGIVPR 190

  Fly   122 ICKDLFTRIQDTETDDLKYSVEVSYMEIYCERVRDLL-----NPKN--KGNLRVREHPLLGPYVE 179
            ..|.||.:::::   :..:::..|.:|||...::|||     .|.:  ..:|.:...|.....:|
plant   191 AIKGLFKQVEES---NHMFTIHFSMLEIYMGNLKDLLLSEATKPISPIPPSLSIHTDPNGEIDIE 252

  Fly   180 DLSKLAVTDYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFT-----QRRHDLMTNLTTE 239
            :|.||.|.|:.:|..|...|.::|..|:||.|..|||||.:..:..|     :||.:  ||    
plant   253 NLVKLKVDDFNEILRLYKVGCRSRATASTNSNSVSSRSHCMIRVSVTSLGAPERRRE--TN---- 311

  Fly   240 KVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKKKNTKKADFIPYR 304
               ||.||||.||||...|.|.|.|..||..||.||:.||.||::|     ::||:    .||||
plant   312 ---KIWLVDLGGSERVLKTRATGRRFDEGKAINLSLSALGDVINSL-----QRKNS----HIPYR 364

  Fly   305 DSALTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADRAKQI------------------ 351
            :|.||.:|:::||.:|||.|:..|||.:.:..||:.:|.:|.|||.|                  
plant   365 NSKLTQVLKDSLGQDSKTLMLVHISPKEDDLCETICSLNFATRAKNIHLGQDESTEEQAKKEAVM 429

  Fly   352 ------VCKAVVNEDANAKLIRELKEEIQKLRDLLKAEGIEVQEEDELTKSTVIKSPTKSRNRNG 410
                  :.|.....:.:.:.:|.|.|.::||..  |...|| :||.::.:..:..:|.|.||::.
plant   430 MNLQKMMEKIEQEREMSLRKMRNLNETLEKLTG--KPHVIE-EEEKDVVREVIHVTPKKPRNKSR 491

  Fly   411 STTEMAVDQLQ---ASEKLI--AELNETWEE---KLKRTEEIRVQREAVFAEMGVAVKEDGITVG 467
            ..:::....::   :|.:.:  |:.:.|...   |.:|...|.|:.|:  |.:.|..|::.....
plant   492 RASDVFPSFMRPTASSNRRLSGADFSVTPNSSSFKSRRNSMISVRAES--ACLPVKKKKNRFDSA 554

  Fly   468 VFSP----KKTPHLVNLNE-------DPNLSECLLYYI----------------KEGLTRLGTHE 505
            ..|.    .|:..::..|.       ..::|||.:..:                .:..:.:...|
plant   555 CDSSDRSVSKSTSIMRQNTADDATVYSQDISECDIKLVVSEHKPKPLQMGPGSATKSRSNISNFE 619

  Fly   506 ANVPQDI--------------------------QLSGSHILKEHCTFENKNSTVTLLPHKDAIIY 544
            .:|.|.|                          ||..:|.|:.......|:.|.:....|     
plant   620 KDVMQKIGGTEFSRINSWLRSQSENRSYVLDKTQLPATHFLENLNRSLEKSPTQSFTTEK----- 679

  Fly   545 VNGRKLVEPEVLKTGSRVI---LGKNHVF----------------RFTNP--EQARELRDKIETE 588
            :.|.:|...|..||...|:   |....:|                ||..|  |...|.|.....|
plant   680 ITGNELEGIEETKTNETVVNPTLMLKKLFELQCLCSAEEEDQILSRFPIPGYEDDDESRYPPILE 744

  Fly   589 NEA-----ENEVEKTDTQQVDWN--------FAQCE-----LLEKQGIDLKAEMKKRLDNLEEQY 635
            |:.     :||....:....||.        ..:||     ||.:.|:|  ..:|.|...:.|..
plant   745 NDGFSQHIDNEWFGVNNYSADWERDSPATIPLLECEPDLKQLLPELGLD--RSLKPRGLAVAEGA 807

  Fly   636 KREKLQADQQFEEQRK--TYEARIDAL 660
            ....|:|.:...|:.|  |:..::.||
plant   808 APPLLRAQETLGERGKGPTFMQKLQAL 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-104NP_611155.3 KISc_KIF1A_KIF1B 2..358 CDD:276816 131/401 (33%)
Kinesin_assoc 355..498 CDD:465047 31/177 (18%)
FHA_KIF1 474..574 CDD:438757 25/167 (15%)
YhaN <575..>666 CDD:443752 26/108 (24%)
KIF1B 878..924 CDD:463574
DUF3694 1199..1347 CDD:463599
PH_KIFIA_KIFIB 1602..1704 CDD:269939
AT1G55550NP_564696.2 Motor_domain 89..411 CDD:473979 129/370 (35%)
Blue background indicates that the domain is not in the aligned region.

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