DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-104 and AT1G18550

DIOPT Version :10

Sequence 1:NP_611155.3 Gene:unc-104 / 36876 FlyBaseID:FBgn0267002 Length:1739 Species:Drosophila melanogaster
Sequence 2:NP_173290.4 Gene:AT1G18550 / 838436 AraportID:AT1G18550 Length:725 Species:Arabidopsis thaliana


Alignment Length:504 Identity:165/504 - (32%)
Similarity:250/504 - (49%) Gaps:75/504 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSVKVAVRVRPFNSREIARESKCIIEMAGA----TTAITNPKVPPNTSD-------SVKRFNFD 54
            :|.:.|.||:||...:|....|:|.:::...    .|..|      |.:|       .|:.|.||
plant   149 VSRILVFVRLRPMGKKERENGSRCCVKVLNKRDVYLTEFT------NENDYLRLKRLRVRHFTFD 207

  Fly    55 YSYWSHDHHDADFSTQSMVYKDIGEEMLQHSFDGYNVCIFAYGQTGAGKSYTMMGRQEEQQEGII 119
            .|:       .:.:||..||.....::::...:|.|..:|.||.|||||:|||:|..|  ..|::
plant   208 SSF-------PETTTQQEVYSTTTGDLVEAVLEGRNGSVFCYGATGAGKTYTMLGTME--NPGVM 263

  Fly   120 PMICKDLFTRIQDTETDDLKYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKL 184
            .:..||||.:::....|. .:.|.:||:|:|.|.|||||:|   |...:......|.....|::.
plant   264 VLAIKDLFAKVRQRSLDG-NHVVHLSYLEVYNETVRDLLSP---GRPLILREDKQGIVAAGLTQY 324

  Fly   185 AVTDYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFTQRRHDLMTNLTTEKVSKISLVDL 249
            ......::..|:..||:.||...|..|||||||||:..:....:..|...|:.: :|.|:||:||
plant   325 RAYSTDEVMALLQRGNQNRTTEPTRCNETSSRSHAILQVIVEYKTRDASMNIIS-RVGKLSLIDL 388

  Fly   250 AGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKKKNTKKADFIPYRDSALTWLLRE 314
            ||||||.:|..:..|..||||||:||..|...|:||.|  .||       .||||:|.||.||::
plant   389 AGSERALATDQRTLRSLEGANINRSLLALSSCINALVE--GKK-------HIPYRNSKLTQLLKD 444

  Fly   315 NLGGNSKTAMIAAISPADINYDETLSTLRYADRAKQI-VCKAVVNEDA----------NAKLIRE 368
            :|||:..|.|||.|||:..::.||.:||.:|||||:| |.:..|||:.          .|||:.|
plant   445 SLGGSCNTVMIANISPSSQSFGETQNTLHWADRAKEIRVKECEVNEEVVQVGEEEGADQAKLLLE 509

  Fly   369 LKEEIQKLRDLLKAEGIEVQEEDELTKSTVIKSPTKSRNRNGSTTEMAVDQLQASEKLIAE---- 429
            |::|..:||..|      .:::.:|...........:.|.|.|.|..::..|......:..    
plant   510 LQKENSELRVQL------AKQQQKLLTLQAENIAAANNNNNISLTPPSISSLMTPPSALTAQQKK 568

  Fly   430 ------LNET--WEEKLKRT------EEIRVQREAVFAEMGVAVKEDGI 464
                  |:.|  ..|.||||      :|:::..:|:..||....:|.|:
plant   569 KPRHSLLSGTCFTPESLKRTKAEEAVKELQLTVKALKMEMERMKREHGL 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-104NP_611155.3 KISc_KIF1A_KIF1B 2..358 CDD:276816 134/367 (37%)
Kinesin_assoc 355..498 CDD:465047 31/138 (22%)
FHA_KIF1 474..574 CDD:438757
YhaN <575..>666 CDD:443752
KIF1B 878..924 CDD:463574
DUF3694 1199..1347 CDD:463599
PH_KIFIA_KIFIB 1602..1704 CDD:269939
AT1G18550NP_173290.4 Kinesin 157..481 CDD:459720 129/352 (37%)
Blue background indicates that the domain is not in the aligned region.

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