DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-104 and Klp3A

DIOPT Version :9

Sequence 1:NP_611155.3 Gene:unc-104 / 36876 FlyBaseID:FBgn0267002 Length:1739 Species:Drosophila melanogaster
Sequence 2:NP_001284830.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster


Alignment Length:1275 Identity:320/1275 - (25%)
Similarity:499/1275 - (39%) Gaps:352/1275 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSVKVAVRVRPFNSREIARESKCIIEMA--GATTAITNPKVPPNTSDSVKRFNFDYSYWSHDHHD 64
            |.|.||:||||....|:.|..:..:|.:  ||      |:|..|.::|   :.::|.:      |
  Fly     7 SCVAVALRVRPLVQSELDRGCRIAVERSADGA------PQVTVNRNES---YTYNYVF------D 56

  Fly    65 ADFSTQSMVYKDIGEEMLQHS----FDGYNVCIFAYGQTGAGKSYTM---MGRQEEQQEGIIPMI 122
            .|.|     .||:.|..:|..    .:||||.|.||||||:||:|||   .....:...|:||..
  Fly    57 IDDS-----QKDLFETCVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGVLDDHVGVIPRA 116

  Fly   123 CKDLFTRIQDTETDDLKYSVEVSYMEIYCERVRDLLNPK--NKGNLRVRE--HPLLGPYVEDLSK 183
            ..|:||.|.:.:: :.:::|..|::|:|.|:..||.:.|  :|..:.:||  :.::.|   .|::
  Fly   117 VHDIFTAIAEMQS-EFRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNRIIMP---GLTE 177

  Fly   184 LAVTDYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFTQRRHDLMTNLTTEKVSKISLVD 248
            |.||..|.:.|.:..|:..|.||||.||||||||||:||:.....:.|...::||   |:.:|||
  Fly   178 LVVTSAQQVTDHLIRGSAGRAVAATAMNETSSRSHAIFTLTLVATKLDGKQSVTT---SRFNLVD 239

  Fly   249 LAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKKKNTKKADFIPYRDSALTWLLR 313
            ||||||...|.|.|.|.|||.||||.|..||.||:||.       :.:.|.:||||.|.||.||:
  Fly   240 LAGSERCSKTLASGDRFKEGVNINKGLLALGNVINALG-------SGQAAGYIPYRQSKLTRLLQ 297

  Fly   314 ENLGGNSKTAMIAAISPADINYDETLSTLRYADRAKQIVCKAVVNEDANAKLIRELKEEIQKLR- 377
            ::|||||.|.|||.:||||.|..||||||||||||.||..|.|||.|.:|..:..||:.||||| 
  Fly   298 DSLGGNSITLMIACVSPADYNVAETLSTLRYADRALQIKNKPVVNLDPHAAEVNMLKDVIQKLRV 362

  Fly   378 DLLK------------------------------AEGIEVQEEDELTKSTVIKSPTKSRNRNGST 412
            :||.                              |...|:|...|..::...::....:..:.|.
  Fly   363 ELLSGGKMSSSLISAVGAAGLGAIPCEESLAGSMANAAEIQRLKEQVRTLQDRNRKLQQELHQSL 427

  Fly   413 TEMAVDQL------QASEKL---IAELNETWEEK-----------------------------LK 439
            .::...::      ||.:||   ::||....:::                             |:
  Fly   428 LDLTEKEMRAHIAEQAHDKLRSHVSELKNKLDQREQAQFGNENTNGDNEMRDFSLLVNRVHVELQ 492

  Fly   440 RTEEIRVQREAVFAEMGVAVKEDGITVGVFSPKKTPH--------------------LVNLNEDP 484
            ||:|   :.|:...|....:.....|.|..|.....|                    |.|:|...
  Fly   493 RTQE---ELESQGHESRQRLSSRSHTEGGESGGDEVHEMLHSHSEEYTNKQMNFAGELRNINRQL 554

  Fly   485 NLSECLLYYIKEGLTRLGTHEANVP--------QDIQLSGSHILKEHCTFENKNSTVTLLPHKDA 541
            :|.:.|...|....:||.:.:.:|.        .|::.....::.:....::|:.:..|...:  
  Fly   555 DLKQELHERIMRNFSRLDSDDEDVKLRLCNQKIDDLEAERRDLMDQLRNIKSKDISAKLAEER-- 617

  Fly   542 IIYVNGRK---LVEPEVLKTGSRVILGKNHV-FRFTNPEQARELRDKIETENEAE--------NE 594
                  ||   |:|.|:.....::|...|.: .|....|:.:.|..:|.|..|::        .|
  Fly   618 ------RKRLQLLEQEISDLRRKLITQANLLKIRDKEREKIQNLSTEIRTMKESKVKLIRAMRGE 676

  Fly   595 VEKTDTQQVDWNFAQCELL-EKQGIDLKAEMKKRLDNLEEQYKREKLQADQQFEEQRKTYEA--- 655
            .||         |.|.::: ||:...||::.:|....:..|   :.|.:.|:...:||..||   
  Fly   677 SEK---------FRQWKMVREKELTQLKSKDRKMQSEIVRQ---QTLHSKQRQVLKRKCEEALAA 729

  Fly   656 --RI-DALQKQVEEQSMTMSMYSSYSPEDFHQEEDVYTNPMYESCWTAREAGLAA---------- 707
              |: |||::|...|:..            |:.:|              ..|.||          
  Fly   730 NKRLKDALERQASAQAQR------------HKYKD--------------NGGSAAGSSNANAKTD 768

  Fly   708 -WAFRKWRY--------HQFTSLRDD--LWGNAIFL------------KEANAISVELKKKVQFQ 749
             |..|:...        |....|.:|  :..|...|            .|...|...|:::::.:
  Fly   769 SWVDRELEIILSLIDAEHSLEQLMEDRAVINNHYHLLQQEKTSDPAEAAEQARILASLEEELEMR 833

  Fly   750 FTLLTDTLYSPLPPELASTVAPVHQ------EDEFGAPPVSKTLVAVEVTDTKNGATHHWSLEKL 808
            ...::|......|.:|.|.:..:.:      |....:..:.||||........:......:|::|
  Fly   834 NAQISDLQQKVCPTDLDSRIRSLAEGVQSLGESRTVSKQLLKTLVQQRRLQASSLNEQRTTLDEL 898

  Fly   809 RYRLELMRQIYNVESPPSSMLFDTSGMEALSGWISPPSQHPGQQ-AQLLPLE------------- 859
            |.:|...:|..:..|....:|               .|||..|. ||....|             
  Fly   899 RAQLLDAQQQEDAASKRLRLL---------------QSQHEEQMLAQQRAYEEKVSVLIRTANQR 948

  Fly   860 -----PPVESERGRLTLANLIPSR----QRLELMREMYHNEAEMSPTSPDYNVESLTGGDPFYDR 915
                 .|.|.::....|..|:.||    |.|:.:|....::::...:.|.             |.
  Fly   949 WAEARSPAEDQQRNQILEELLSSREALQQELDKLRAKNKSKSKAVKSEPQ-------------DL 1000

  Fly   916 FPWFRMV-GRSFIYLSNLLYP---VPLVHKVAIVNERGDVRGYLRIAVQPVLDEESIDFNNGVKQ 976
            ...|::| |...:.||::...   ||...|...:  :.|.|..  |:.....|.......|...|
  Fly  1001 DDSFQIVDGNETVVLSDVSDDPDWVPSTSKSKRI--QSDSRNV--ISPPEKQDANVTSLGNSSIQ 1061

  Fly   977 SARLVFNEDDAKP----KYRA-----------------------------LNEKDDVQRYIDNGG 1008
            |.......:|.|.    |.|.                             ||.||...:..|.  
  Fly  1062 SLNSTSATEDGKRCKGCKCRTKCTTKRCGCLSGNNACSETCVCKSNCRNPLNLKDHASQCGDG-- 1124

  Fly  1009 LDSKLEELEDVDSGRGIDSNSASECHENS------EEPGE 1042
             |.:.:|.||.|.......:......||:      |.||:
  Fly  1125 -DGQKDETEDADKSDDDGDDEPQTSKENAVKFVTPEAPGK 1163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-104NP_611155.3 KISc_KIF1A_KIF1B 2..358 CDD:276816 155/368 (42%)
KISc 3..358 CDD:214526 154/367 (42%)
Kinesin_assoc 355..498 CDD:292801 41/231 (18%)
FHA 475..574 CDD:238017 21/130 (16%)
KIF1B 878..923 CDD:289208 8/49 (16%)
DUF3694 1246..1347 CDD:289256
PH_KIFIA_KIFIB 1602..1704 CDD:269939
PH 1607..1700 CDD:278594
Klp3ANP_001284830.1 KISc_KIF4 7..336 CDD:276823 152/362 (42%)
Kinesin 14..335 CDD:278646 147/354 (42%)
Smc <396..>994 CDD:224117 116/661 (18%)
FlaC 522..633 CDD:225888 18/118 (15%)
TCR 1075..1110 CDD:281618 2/34 (6%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437948
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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