DRSC/TRiP Functional Genomics Resources

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Protein Alignment unc-104 and Kif1c

DIOPT Version :9

Sequence 1:NP_611155.3 Gene:unc-104 / 36876 FlyBaseID:FBgn0267002 Length:1739 Species:Drosophila melanogaster
Sequence 2:XP_036012244.1 Gene:Kif1c / 16562 MGIID:1098260 Length:1112 Species:Mus musculus


Alignment Length:1011 Identity:485/1011 - (47%)
Similarity:621/1011 - (61%) Gaps:152/1011 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSVKVAVRVRPFNSREIARESKCIIEMAGATTAITNPKVPPNTSDSVKRFNFDYSYWSHDH-HDA 65
            :||||||||||||:||.::::||::.|.|.||:|.|||   .:.|:.|.|.||||||||.. .|.
Mouse     4 ASVKVAVRVRPFNARETSQDAKCVVSMQGNTTSIINPK---QSKDAPKSFTFDYSYWSHTSVEDP 65

  Fly    66 DFSTQSMVYKDIGEEMLQHSFDGYNVCIFAYGQTGAGKSYTMMGRQEEQQEGIIPMICKDLFTRI 130
            .|::|..||:|||||||.|:|:|||||||||||||||||||||||||..|:||:|.:|:|||:|:
Mouse    66 QFASQQQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGRQEPGQQGIVPQLCEDLFSRV 130

  Fly   131 QDTETDDLKYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTDYQDIHDL 195
            ...::..|.||||||||||||||||||||||::|:|||||||:|||||:||||||||.|.||.||
Mouse   131 NVNQSAQLSYSVEVSYMEIYCERVRDLLNPKSRGSLRVREHPILGPYVQDLSKLAVTSYADIADL 195

  Fly   196 IDEGNKARTVAATNMNETSSRSHAVFTIFFTQRRHDLMTNLTTEKVSKISLVDLAGSERADSTGA 260
            :|.|||||||||||||||||||||||||.||||.||.:|.|.:|||||||||||||||||||:||
Mouse   196 MDCGNKARTVAATNMNETSSRSHAVFTIVFTQRSHDQLTGLDSEKVSKISLVDLAGSERADSSGA 260

  Fly   261 KGTRLKEGANINKSLTTLGKVISALAEVASKKKNTKKADFIPYRDSALTWLLRENLGGNSKTAMI 325
            :|.|||||||||||||||||||||||::.|||   :|:||||||||.|||||:|||||||:||||
Mouse   261 RGMRLKEGANINKSLTTLGKVISALADLQSKK---RKSDFIPYRDSVLTWLLKENLGGNSRTAMI 322

  Fly   326 AAISPADINYDETLSTLRYADRAKQIVCKAVVNEDANAKLIRELKEEIQKLRDLLKAEGIEVQ-- 388
            ||:|||||||:|||||||||||.|||.|.||:|||.||:|||||:||:.:|||||.|:|:...  
Mouse   323 AALSPADINYEETLSTLRYADRTKQIRCNAVINEDPNARLIRELQEEVARLRDLLMAQGLSASAL 387

  Fly   389 ---EEDELTKSTVI---------KSPTKSRNRNGST-------------TEMAVDQLQASEKLIA 428
               :.:|.:...|:         .||:.....||..             .|.|:::||.:||:||
Mouse   388 GGLKVEEGSPGGVLPPASSPPAPASPSSPPPHNGELEPSFSPSAEPQIGPEEAMERLQETEKIIA 452

  Fly   429 ELNETWEEKLKRTEEIRVQREAVFAEMGVAVKEDGITVGVFSPKKTPHLVNLNEDPNLSECLLYY 493
            ||||||||||::||.:|::|||:.|||||||:|||.||||||||||||||||||||.:||||||:
Mouse   453 ELNETWEEKLRKTEALRMEREALLAEMGVAVREDGGTVGVFSPKKTPHLVNLNEDPLMSECLLYH 517

  Fly   494 IKEGLTRLGTHEANVPQDIQLSGSHILKEHCTFE-----NKNSTVTLLPHKDAIIYVNGRKLVEP 553
            ||:|:||:|    .|..||:|:|..|.::||.|.     :....|||.|.:.|..||||:.:.||
Mouse   518 IKDGVTRVG----QVDVDIKLTGQFIREQHCLFRSIPQPDGEVMVTLEPCEGAETYVNGKLVTEP 578

  Fly   554 EVLKTGSRVILGKNHVFRFTNPEQARELRDKIETENEAENEVEK---TDTQQVDWNFAQCELLEK 615
            .|||:|:|:::||||||||.:|||||         .|.|..|..   ..::.|||||||.||||:
Mouse   579 LVLKSGNRIVMGKNHVFRFNHPEQAR---------LERERGVPPPPGPPSEPVDWNFAQKELLEQ 634

  Fly   616 QGIDLKAEMKKRLDNLEEQYKREKLQADQQFEEQRKTYEARIDALQKQVEEQSMTMSMYSSYSPE 680
            ||||:|.||:|||.:||.||::||.:||...|:||             :...:...:....|:..
Mouse   635 QGIDIKLEMEKRLQDLENQYRKEKEEADLLLEQQR-------------LVRDTWGPTEPGQYADS 686

  Fly   681 DFHQEEDVYTNPMYESCWTAREAGLAAWAFRKWRYHQFTSLRDDLWGNAI--FLKEANAISVELK 743
            |..::.|      ..||            ...||.  .:|||:.|....:  .:|.....|...:
Mouse   687 DSGEDSD------KRSC------------EESWRL--ISSLREQLPPTTVQNIVKRCGLPSSGKR 731

  Fly   744 KKVQFQFTLLTDTLYSPLPPELASTVAPVHQEDEFGAPPVSKTLVAVEVTDTKNGATHHWSLEKL 808
            :..:..:.:..........|..| |:|.:..:      .|.:....|.:.|.::|.....:|..|
Mouse   732 RAPRRVYQIPQRRRLQGKDPRWA-TMADLKMQ------AVKEICYEVALADFRHGRAEIEALAAL 789

  Fly   809 RYRLELMRQIYNVESPPSSM------LFDTSGMEALSGWISPPSQHPGQQAQLLPLEPPVESERG 867
            :.| ||.|.....|.|..:.      ::||.|.|...|.....|:...:.|::..|...::...|
Mouse   790 KMR-ELCRTYGKPEGPGDAWRAVARDVWDTVGEEEGCGGGGGGSEEGARGAEVEDLRAHIDKLTG 853

  Fly   868 ----------------------RLTLANLIPSRQRL------------------ELMREMYHNE- 891
                                  .|.:..:||..|.|                  |.:.|...|: 
Mouse   854 ILQEVKLQNSSKDRELQALRDRMLRMERVIPLTQDLEDDNDESGLVTWAPPEGPEAVEETVPNDH 918

  Fly   892 -AEMSPTSPDYN----VESLTGGDPFY--DRFPWFR 920
             ..:.||||..:    |..|...||.:  .|..|.:
Mouse   919 SPAVRPTSPPLSSWERVSRLMEEDPAFRRGRLRWLK 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-104NP_611155.3 KISc_KIF1A_KIF1B 2..358 CDD:276816 265/356 (74%)
KISc 3..358 CDD:214526 265/355 (75%)
Kinesin_assoc 355..498 CDD:292801 89/169 (53%)
FHA 475..574 CDD:238017 55/103 (53%)
KIF1B 878..923 CDD:289208 15/69 (22%)
DUF3694 1246..1347 CDD:289256
PH_KIFIA_KIFIB 1602..1704 CDD:269939
PH 1607..1700 CDD:278594
Kif1cXP_036012244.1 KISc_KIF1A_KIF1B 4..355 CDD:276816 265/356 (74%)
Kinesin_assoc 352..522 CDD:406567 89/169 (53%)
FHA 499..599 CDD:238017 55/103 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 137 1.000 Domainoid score I4857
eggNOG 1 0.900 - - E2759_KOG0245
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131864at33208
OrthoFinder 1 1.000 - - FOG0001470
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100247
Panther 1 1.100 - - O PTHR24115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.780

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