DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unc-104 and kif28

DIOPT Version :9

Sequence 1:NP_611155.3 Gene:unc-104 / 36876 FlyBaseID:FBgn0267002 Length:1739 Species:Drosophila melanogaster
Sequence 2:XP_021322979.1 Gene:kif28 / 100537112 ZFINID:ZDB-GENE-130530-1027 Length:1037 Species:Danio rerio


Alignment Length:1120 Identity:318/1120 - (28%)
Similarity:478/1120 - (42%) Gaps:326/1120 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VKVAVRVRPFNSREIARESKCIIEMAGATTAITNPKVPPNTSDSVKRFNFDYSYWSH-------- 60
            |||||||||||.||....|:|||.|...:.:|.:|:    .|.:.:.|.|||:||||        
Zfish    14 VKVAVRVRPFNKRERDAGSRCIISMTSNSISIQDPR----NSQNSRTFTFDYTYWSHSGFSRNKD 74

  Fly    61 -----DHHDADFSTQSMVYKDIGEEMLQHSFDGYNVCIFAYGQTGAGKSYTMMGRQEEQQEGIIP 120
                 :.....::.|:.|:.|:|:.:|.::..|||..:.||||||:||||:|:|  ....:|:||
Zfish    75 GLFVPEETGGRYADQASVFLDLGQGILDNALQGYNATLLAYGQTGSGKSYSMVG--YGPNKGLIP 137

  Fly   121 MICKDLFTRIQDTETDDLKYSVEVSYMEIYCERVRDLLNPKNK--GNLRVREHPLLGPYVEDLSK 183
            .:|:.||..|:..: |..:..|..|.:|||.|:|.|||:..::  |.|||||....|.|||.|.:
Zfish   138 TLCQRLFQSIRSMQ-DSRQCQVFFSMLEIYNEQVVDLLSKSSRSAGGLRVREDQQTGFYVEGLRR 201

  Fly   184 LAVTDYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFTQRRHDLMTNLTTEKVSKISLVD 248
            :.......:..|:::|.:.||.|||::|.:|||||.:..:...|    :.:.....|.|.|.|||
Zfish   202 VPCDSALQVEQLMEQGTRTRTTAATHINNSSSRSHMLIIVQLKQ----IFSKECITKQSNIYLVD 262

  Fly   249 LAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKKKNTKKADFIPYRDSALTWLLR 313
            ||||||..|:|::|.|||||..||.||||||.||||||::|..||     .:||||||.||.||:
Zfish   263 LAGSERQRSSGSEGDRLKEGTAINLSLTTLGNVISALADMALGKK-----IYIPYRDSVLTKLLQ 322

  Fly   314 ENLGGNSKTAMIAAISPADINYDETLSTLRYADRAKQIVCKAVVNEDANAKLIRELKEEIQKLRD 378
            ..|||||:|.|||.:|||||.|:|:|||||||:|||:|..||||||....:|::|||.|..||..
Zfish   323 SALGGNSRTVMIATLSPADICYEESLSTLRYAERAKKIQNKAVVNESPTERLVKELKAENAKLLL 387

  Fly   379 LLKAEGIEVQE-EDELTKSTVIKSPTKSRNRNGSTTEMAVDQLQAS-EKLIAELNETWEEKLKRT 441
            .|...|.|.:: |||          :|...|..:..|:.:..:|.. |:.:.|..:.||     |
Zfish   388 RLSRLGQEGRKAEDE----------SKELRRLLTHNELQIRAIQTLWEQHLQEALKDWE-----T 437

  Fly   442 EEIRVQREAVFAEMGVAVKEDGITVGVFSPKKTPHLVNLNEDPNLSECLLYYIKEGLTRLGTHEA 506
            :...:.:|....:|                  .|:::|:|||..||..:..:|:||...:|..: 
Zfish   438 QYATITQERRMMQM------------------YPYIMNVNEDAQLSSVVKLFIQEGEWDIGLAD- 483

  Fly   507 NVPQDIQLSGSHILKEHCTFENKNSTVTLLPHKDAIIYVNGRKLVEPEVLKTGSRVILGKNHVFR 571
            |.|:.:.:.|..|.::|..|.|:...|::.|...|.:.|||.::.:...|:...|::||.|..:.
Zfish   484 NSPRALSIRGLGIQEKHAVFSNQQRRVSITPVSGAKVIVNGLQVSKRTELQHLDRLVLGSNSTYL 548

  Fly   572 FTNPEQARELRDKIETENEAENEVEKTDTQQVDWNFAQCELLEKQGIDLKAEMKKRLDNLEEQYK 636
            |..          ..:|..||      |..:.|:::.|.||...:|..:                
Zfish   549 FIG----------FPSERSAE------DWSRYDYDYFQSELAAAEGFHI---------------- 581

  Fly   637 REKLQADQQFEEQRKTYEARIDALQKQVEEQSMTMSMYSSYSPEDFHQEEDVYTNPMYESCWTAR 701
             :.|..||                               .:.|   ||.:.......|:      
Zfish   582 -QSLCDDQ-------------------------------GHRP---HQPDPSLLAVFYD------ 605

  Fly   702 EAGLAAWAFRKWRYHQFTSLRDDLWGNAIFLKEANAISVELKKKVQFQFTLLTDTLYSPLPPELA 766
                         |.:...:          :.|||.:|.||||.|:|:..:          ..||
Zfish   606 -------------YIKLMPM----------VTEANQMSAELKKGVEFKLEI----------KNLA 637

  Fly   767 STVAPVH--QEDEFGAPPVSKTLVAVEVTDTKNGATHHWSLEKLRYRLELMRQIYNVESPPSSML 829
            .:.:..|  ::|           :||:||..::.....||..|...|..||.::|          
Zfish   638 MSDSKGHDLEKD-----------IAVKVTSVESKQVWMWSKAKFINRKFLMEEVY---------- 681

  Fly   830 FDTSGMEALSGWISPPSQHPGQQAQLLPLEPPVESERGRLTLANLIPSRQRLELMREMYHNEAEM 894
                 .:.::|         |:.|...||                  .|.|              
Zfish   682 -----QQQVAG---------GEGADRAPL------------------PRDR-------------- 700

  Fly   895 SPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFIYLSNLLYPVPLVHKVAIVNERGDVRGYLRIAV 959
                           |||:|......: |.:.::|.:|.:.:||..:|.:|...|.....|:..:
Zfish   701 ---------------DPFWDPLEPLHL-GSAHLWLQSLAFRIPLEEQVEMVGPEGTEEAILQAQL 749

  Fly   960 QP------VLDEESI------------DF-----------------NNGVKQSARLVFNED---- 985
            .|      .|.|:.|            ||                 |.|| |....||:..    
Zfish   750 VPCSPAGLALGEDDILIDPSELLGKRLDFQLVLDQCCGLRWVKEARNRGV-QIGFQVFDCPQPLY 813

  Fly   986 ------------DAKPKYRALNEKDDVQRYIDNGGLDSKL--------EELEDVDSGRG------ 1024
                        |.:.::.||....|:..|:.:..|..:|        |.|.::|..:.      
Zfish   814 TPAVWHNVNPLLDHRVQFTALRTSQDLLNYLQSNALVLELWGLQEGCSELLSNMDGMKMTQEDSV 878

  Fly  1025 -IDSNSASECHENSE 1038
             ||..|||| |..:|
Zfish   879 IIDKISASE-HLTAE 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unc-104NP_611155.3 KISc_KIF1A_KIF1B 2..358 CDD:276816 169/368 (46%)
KISc 3..358 CDD:214526 169/368 (46%)
Kinesin_assoc 355..498 CDD:292801 38/144 (26%)
FHA 475..574 CDD:238017 30/98 (31%)
KIF1B 878..923 CDD:289208 6/44 (14%)
DUF3694 1246..1347 CDD:289256
PH_KIFIA_KIFIB 1602..1704 CDD:269939
PH 1607..1700 CDD:278594
kif28XP_021322979.1 Motor_domain 14..367 CDD:328930 169/368 (46%)
FHA 453..551 CDD:238017 30/98 (31%)
KIF1B 670..708 CDD:315155 15/108 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D76316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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