DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15617 and Whrn

DIOPT Version :9

Sequence 1:NP_611151.1 Gene:CG15617 / 36871 FlyBaseID:FBgn0034151 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001008791.1 Gene:Whrn / 73750 MGIID:2682003 Length:918 Species:Mus musculus


Alignment Length:144 Identity:34/144 - (23%)
Similarity:59/144 - (40%) Gaps:34/144 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFDSKIR----------VPKYDSDAFDNVAYELQMTYTLET-----------------DCRIMSF 38
            :.||.::          :|:.|...||.  |..:..|...|                 :.|::|.
Mouse    82 LLDSPVKRRLLPMLRLVIPRSDQLLFDQ--YTAEGLYLPATTPYRQPAWAAPDGAGPGEVRLVSL 144

  Fly    39 YDAM----WGMEVTGGIDQFEPLTIVNVSPTGLAKRGGMRVGDEITQINDVPALEMTFNEALQMF 99
            ..|.    .|..:.||.:....:.:..|.|..||::.|:||||:|.::||.....:|..||::..
Mouse   145 RRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKAL 209

  Fly   100 RKNSRYV-RVYVRG 112
            :.:.:.| .||..|
Mouse   210 KGSKKLVLSVYSAG 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15617NP_611151.1 PDZ_signaling 30..111 CDD:238492 25/102 (25%)
WhrnNP_001008791.1 HN_L-whirlin_R1_like 38..113 CDD:259822 7/32 (22%)
PDZ_signaling 139..216 CDD:238492 21/76 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..266
PDZ_signaling 278..358 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..407
HN_L-whirlin_R2_like 420..500 CDD:259823
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..538
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 560..824
PDZ_signaling 827..898 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.