DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15617 and lnx2b

DIOPT Version :9

Sequence 1:NP_611151.1 Gene:CG15617 / 36871 FlyBaseID:FBgn0034151 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_998105.2 Gene:lnx2b / 564464 ZFINID:ZDB-GENE-040426-2500 Length:678 Species:Danio rerio


Alignment Length:105 Identity:28/105 - (26%)
Similarity:48/105 - (45%) Gaps:15/105 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 QMTYTLETDCRIMSFYDAMWGMEVTGGID--QFEPLTIVNVSPTGLAKRGG-MRVGDEITQINDV 85
            :.|.||:.:.|      ...|:.:.||.|  ...|:.|.:|.|.|...|.| ::.||.:..||.:
Zfish   451 EKTVTLKKEPR------QSLGITIAGGRDCRSRLPVYITSVQPVGCLHRDGTVKTGDVLLSINGI 509

  Fly    86 PALEMTFNEALQMFRKNSRYVRVYVR------GDDDAPGE 119
            ....:|:|||:.:.:..:....|.:|      .|::..||
Zfish   510 DLTHLTYNEAVTVLKTQTAQSTVTLRVIQTFADDEEQDGE 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15617NP_611151.1 PDZ_signaling 30..111 CDD:238492 21/83 (25%)
lnx2bNP_998105.2 RING 46..82 CDD:214546
PDZ_signaling 210..291 CDD:238492
PDZ_signaling 325..406 CDD:238492
PDZ_signaling 451..537 CDD:238492 25/91 (27%)
PDZ_signaling 587..671 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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