DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15617 and Cytip

DIOPT Version :9

Sequence 1:NP_611151.1 Gene:CG15617 / 36871 FlyBaseID:FBgn0034151 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001012086.1 Gene:Cytip / 311047 RGDID:1307990 Length:359 Species:Rattus norvegicus


Alignment Length:104 Identity:22/104 - (21%)
Similarity:38/104 - (36%) Gaps:22/104 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IRVPKYDSDAFDNVAYELQMTYTLETDCRIMSFYDAMWGMEVTGGIDQFEPLTIV-NVSPTGLAK 69
            :.|.|.|:..|   .:|:| ||.|:..                 .|...|..|:: .|.....|.
  Rat    78 VTVEKQDNGTF---GFEIQ-TYRLQNQ-----------------NICSSEVCTMICKVQEDSPAH 121

  Fly    70 RGGMRVGDEITQINDVPALEMTFNEALQMFRKNSRYVRV 108
            ..|::|||....:|.|.....|..:.:.:.|.:...:.:
  Rat   122 CAGLQVGDIFANVNGVSTEGFTHKQVVDLIRSSGNLLTI 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15617NP_611151.1 PDZ_signaling 30..111 CDD:238492 13/80 (16%)
CytipNP_001012086.1 PDZ_signaling 76..161 CDD:238492 22/104 (21%)
Interaction with CYTH1. /evidence=ECO:0000250 166..188
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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