DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15617 and Gopc

DIOPT Version :9

Sequence 1:NP_611151.1 Gene:CG15617 / 36871 FlyBaseID:FBgn0034151 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001101101.2 Gene:Gopc / 309774 RGDID:1309512 Length:463 Species:Rattus norvegicus


Alignment Length:80 Identity:25/80 - (31%)
Similarity:37/80 - (46%) Gaps:4/80 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GMEVTGGIDQFEPLTIVNVSPTGLAKR-GGMRVGDEITQINDVPALEMTFNEA---LQMFRKNSR 104
            |:.:|||.:...|:.|..:.|...|.| ||:.|||.:..:|.|...:....||   |...|....
  Rat   301 GISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAVLAVNGVNLRDTKHKEAVTILSQQRGEIE 365

  Fly   105 YVRVYVRGDDDAPGE 119
            :..|||..:.|:..|
  Rat   366 FEVVYVAPEVDSDDE 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15617NP_611151.1 PDZ_signaling 30..111 CDD:238492 22/70 (31%)
GopcNP_001101101.2 SMC_prok_B <35..>215 CDD:274008
PDZ_signaling 287..369 CDD:238492 20/67 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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