DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15617 and Mpdz

DIOPT Version :9

Sequence 1:NP_611151.1 Gene:CG15617 / 36871 FlyBaseID:FBgn0034151 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_006238402.1 Gene:Mpdz / 29365 RGDID:3105 Length:2068 Species:Rattus norvegicus


Alignment Length:84 Identity:26/84 - (30%)
Similarity:46/84 - (54%) Gaps:3/84 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GMEVTGGIDQFEPLTIVN-VSPTGLA-KRGGMRVGDEITQINDVPALEMTFNEALQMFRKNSRYV 106
            |:.:.||.|......|:: |...|.| |.|.:..||:|.::|.:...:.|.:||:.:.|:..:.|
  Rat  1638 GLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRV 1702

  Fly   107 RVYVRGDDDAPGEEDWTCD 125
            |:.:. .|:||.:|:..||
  Rat  1703 RLTLY-RDEAPYKEEDVCD 1720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15617NP_611151.1 PDZ_signaling 30..111 CDD:238492 20/68 (29%)
MpdzXP_006238402.1 L27_2 6..63 CDD:117611
PDZ_signaling 140..222 CDD:238492
PDZ_signaling 256..335 CDD:238492
PDZ 374..463 CDD:214570
PDZ_signaling 552..621 CDD:238492
PDZ_signaling 693..776 CDD:238492
PDZ_signaling 993..1063 CDD:238492
PDZ_signaling 1150..1241 CDD:238492
PDZ 1348..1433 CDD:214570
PDZ_signaling 1482..1561 CDD:238492
MPDZ_u10 1563..1624 CDD:293272
PDZ 1625..1709 CDD:214570 20/71 (28%)
PDZ_signaling 1721..1801 CDD:238492 26/84 (31%)
PDZ_signaling 1858..1943 CDD:238492
PDZ_signaling 1984..2067 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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