DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf6 and btb-18

DIOPT Version :9

Sequence 1:NP_001286499.1 Gene:Idgf6 / 36868 FlyBaseID:FBgn0013763 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_872066.2 Gene:btb-18 / 353391 WormBaseID:WBGene00018201 Length:298 Species:Caenorhabditis elegans


Alignment Length:60 Identity:16/60 - (26%)
Similarity:25/60 - (41%) Gaps:14/60 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LPKKHLVCYYDSASFVKEGLGKLV--IDELEPALQFCDYLVYGYAGIERDSHKAVSLNQQ 83
            |.:.|....:|   |..|.:.|.|  ||     ::|..|....|..::|    ||:|..:
 Worm    47 LSQIHFTWKFD---FASEDIEKFVGTID-----VKFRQYQFQNYVTVQR----AVTLTDR 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf6NP_001286499.1 GH18_IDGF 30..450 CDD:119352 15/56 (27%)
Glyco_18 31..429 CDD:214753 14/55 (25%)
btb-18NP_872066.2 BTB 141..237 CDD:197585
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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